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13/18: gnu: kraken2: Remove reference to %outputs.
From: |
guix-commits |
Subject: |
13/18: gnu: kraken2: Remove reference to %outputs. |
Date: |
Sun, 5 Dec 2021 09:09:28 -0500 (EST) |
rekado pushed a commit to branch core-updates-frozen
in repository guix.
commit 8ae33d6844dd8886ca2032fcd4eb80e6cefe6128
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sun Dec 5 12:55:19 2021 +0100
gnu: kraken2: Remove reference to %outputs.
* gnu/packages/bioinformatics.scm (kraken2)[arguments]: Remove reference to
%outputs by using a gexp.
---
gnu/packages/bioinformatics.scm | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 67baaf3..2f47cd6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -14695,9 +14695,9 @@ international community.")
(build-system gnu-build-system)
(arguments
`(#:tests? #false ; there are none
- #:make-flags (list "-C" "src"
- (string-append "KRAKEN2_DIR="
- (assoc-ref %outputs "out") "/bin"))
+ #:make-flags
+ ,#~(list "-C" "src"
+ (string-append "KRAKEN2_DIR=" #$output "/bin"))
#:phases
(modify-phases %standard-phases
(delete 'configure)
- branch core-updates-frozen updated (c61e49a -> f2b99e3), guix-commits, 2021/12/05
- 03/18: gnu: sjcount: Remove trailing #T., guix-commits, 2021/12/05
- 01/18: gnu: dropseq-tools: Remove trailing #T., guix-commits, 2021/12/05
- 02/18: gnu: dropseq-tools: Remove reference to %build-inputs., guix-commits, 2021/12/05
- 06/18: gnu: intervaltree: Remove reference to %outputs., guix-commits, 2021/12/05
- 04/18: gnu: sjcount: Remove reference to %build-inputs., guix-commits, 2021/12/05
- 05/18: gnu: biobambam2: Remove reference to %build-inputs., guix-commits, 2021/12/05
- 08/18: gnu: adapterremoval: Remove reference to %outputs., guix-commits, 2021/12/05
- 09/18: gnu: ataqv: Remove references to %outputs and %build-inputs., guix-commits, 2021/12/05
- 13/18: gnu: kraken2: Remove reference to %outputs.,
guix-commits <=
- 16/18: gnu: clapack: Pass -fcommon to compiler., guix-commits, 2021/12/05
- 17/18: gnu: metabat: Remove trailing #T., guix-commits, 2021/12/05
- 12/18: gnu: methyldackel: Remove reference to %outputs., guix-commits, 2021/12/05
- 14/18: gnu: tla2tools: Remove remaining reference to %output., guix-commits, 2021/12/05
- 07/18: gnu: bbmap: Remove reference to %build-inputs., guix-commits, 2021/12/05
- 11/18: gnu: phast: Remove reference to %outputs., guix-commits, 2021/12/05
- 10/18: gnu: libsbml: Remove references to %build-inputs., guix-commits, 2021/12/05
- 15/18: gnu: clapack: Remove trailing #T., guix-commits, 2021/12/05
- 18/18: gnu: python-bwapy: Remove pre-built object files., guix-commits, 2021/12/05