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06/06: gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Move to anno
From: |
guix-commits |
Subject: |
06/06: gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Move to annotation section. |
Date: |
Thu, 14 Apr 2022 07:39:44 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 919cecd00b018d596cf8aca10b370c4d91989be9
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Apr 14 13:38:30 2022 +0200
gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Move to annotation
section.
* gnu/packages/bioconductor.scm
(r-illuminahumanmethylation450kanno-ilmn12-hg19):
Move this variable up to the annotation section.
---
gnu/packages/bioconductor.scm | 52 +++++++++++++++++++++----------------------
1 file changed, 26 insertions(+), 26 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 094bd0d907..2fa64c4b0b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -557,6 +557,32 @@ several related annotation packages.")
from several related annotation packages.")
(license license:artistic2.0)))
+(define-public r-illuminahumanmethylation450kanno-ilmn12-hg19
+ (package
+ (name "r-illuminahumanmethylation450kanno-ilmn12-hg19")
+ (version "0.6.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri
+ "IlluminaHumanMethylation450kanno.ilmn12.hg19"
+ version 'annotation))
+ (sha256
+ (base32
+ "059vlxsx3p3fcnywwirahsc6mlk813zpqnbv0jsrag6x5bb8z6r4"))))
+ (properties
+ `((upstream-name
+ . "IlluminaHumanMethylation450kanno.ilmn12.hg19")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-minfi))
+ (home-page
+
"https://bioconductor.org/packages/IlluminaHumanMethylation450kanno.ilmn12.hg19/")
+ (synopsis "Annotation for Illumina's 450k methylation arrays")
+ (description
+ "This package provides manifests and annotation for Illumina's 450k array
+data.")
+ (license license:artistic2.0)))
+
(define-public r-org-ce-eg-db
(package
(name "r-org-ce-eg-db")
@@ -11134,32 +11160,6 @@ regulatory networks from expression data.")
Characteristic} (ROC) curves, with a focus on micro arrays.")
(license license:artistic2.0)))
-(define-public r-illuminahumanmethylation450kanno-ilmn12-hg19
- (package
- (name "r-illuminahumanmethylation450kanno-ilmn12-hg19")
- (version "0.6.0")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri
- "IlluminaHumanMethylation450kanno.ilmn12.hg19"
- version 'annotation))
- (sha256
- (base32
- "059vlxsx3p3fcnywwirahsc6mlk813zpqnbv0jsrag6x5bb8z6r4"))))
- (properties
- `((upstream-name
- . "IlluminaHumanMethylation450kanno.ilmn12.hg19")))
- (build-system r-build-system)
- (propagated-inputs (list r-minfi))
- (home-page
-
"https://bioconductor.org/packages/IlluminaHumanMethylation450kanno.ilmn12.hg19/")
- (synopsis "Annotation for Illumina's 450k methylation arrays")
- (description
- "This package provides manifests and annotation for Illumina's 450k array
-data.")
- (license license:artistic2.0)))
-
(define-public r-watermelon
(package
(name "r-watermelon")
- branch master updated (cab6657094 -> 919cecd00b), guix-commits, 2022/04/14
- 02/06: gnu: r-abarray: Move out of experiments section., guix-commits, 2022/04/14
- 03/06: gnu: r-absseq: Move out of experiments section., guix-commits, 2022/04/14
- 06/06: gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Move to annotation section.,
guix-commits <=
- 04/06: gnu: r-chromvarmotifs: Move to (gnu packages bioinformatics)., guix-commits, 2022/04/14
- 01/06: gnu: r-aneufinder: Move to packages section., guix-commits, 2022/04/14
- 05/06: gnu: r-snplocs-hsapiens-dbsnp144-grch37: Move to annotation section., guix-commits, 2022/04/14