01/16: gnu: cereal: Update to 1.3.2.

[guix-commits]

mbakke pushed a commit to branch master
in repository guix.

commit 0b55b036c1cdd5409c638e4ab3efea1deea1b708
Author: Marius Bakke <marius@gnu.org>
AuthorDate: Tue Aug 9 15:48:30 2022 +0200

    gnu: cereal: Update to 1.3.2.
    
    * gnu/packages/serialization.scm (cereal): Update to 1.3.2.
    [arguments]: Use G-expression.
    (cereal-1.3.0): New variable.
    * gnu/packages/bioinformatics.scm (salmon)[inputs]: Change from CEREAL to
    CEREAL-1.3.0.
    * gnu/packages/engineering.scm (prusa-slicer)[inputs]: Likewise.
---
 gnu/packages/bioinformatics.scm |  2 +-
 gnu/packages/engineering.scm    |  2 +-
 gnu/packages/serialization.scm  | 60 ++++++++++++++++++++++++++++++-----------
 3 files changed, 46 insertions(+), 18 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 289079b766..3a40cc2281 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10017,7 +10017,7 @@ The following file formats are supported:
     (inputs
      `(("boost" ,boost)
        ("bzip2" ,bzip2)
-       ("cereal" ,cereal)
+       ("cereal" ,cereal-1.3.0)
        ("curl" ,curl)
        ("eigen" ,eigen)
        ("jemalloc" ,jemalloc)
diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm
index 0e28a0c428..ed87cd8d6a 100644
--- a/gnu/packages/engineering.scm
+++ b/gnu/packages/engineering.scm
@@ -3222,7 +3222,7 @@ visualization, matrix manipulation.")
      (list pkg-config))
     (inputs
      (list boost
-           cereal
+           cereal-1.3.0
            cgal
            curl
            dbus
diff --git a/gnu/packages/serialization.scm b/gnu/packages/serialization.scm
index cec9b68299..1f2f7ff47f 100644
--- a/gnu/packages/serialization.scm
+++ b/gnu/packages/serialization.scm
@@ -2,7 +2,7 @@
 ;;; Copyright © 2015, 2017, 2019, 2020, 2021 Ricardo Wurmus 
<rekado@elephly.net>
 ;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
 ;;; Copyright © 2016 David Craven <david@craven.ch>
-;;; Copyright © 2016, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
+;;; Copyright © 2016, 2019, 2020, 2022 Marius Bakke <marius@gnu.org>
 ;;; Copyright © 2016, 2018, 2019, 2021 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017 Corentin Bocquillon <corentin@nybble.fr>
 ;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
@@ -31,6 +31,7 @@
 (define-module (gnu packages serialization)
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix packages)
+  #:use-module (guix gexp)
   #:use-module (guix download)
   #:use-module (guix hg-download)
   #:use-module (guix git-download)
@@ -132,7 +133,7 @@ implement RPC protocols.")
 (define-public cereal
   (package
     (name "cereal")
-    (version "1.3.0")
+    (version "1.3.2")
     (source
      (origin
        (method git-fetch)
@@ -142,22 +143,22 @@ implement RPC protocols.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "0hc8wh9dwpc1w1zf5lfss4vg5hmgpblqxbrpp1rggicpx9ar831p"))))
+         "02sd90ynya7wg013zwzjr79fsv4bzqgfg9l2mapd4j38rv06gahx"))))
     (build-system cmake-build-system)
     (arguments
-     `(#:configure-flags '("-DSKIP_PORTABILITY_TEST=ON")
-       #:phases
-       (modify-phases %standard-phases
-         (add-before 'configure 'skip-sandbox
-           (lambda _
-             (substitute* "CMakeLists.txt"
-               (("add_subdirectory\\(sandbox\\)") ""))))
-         (add-after 'install 'install-doc
-           (lambda _
-             (let ((doc (string-append %output "/share/doc/html")))
-               (invoke "make" "doc")
-               (mkdir-p doc)
-               (copy-recursively "doc/html" doc)))))))
+     (list
+      #:configure-flags #~'("-DSKIP_PORTABILITY_TEST=ON"
+                            ;; Don't bother building the sandbox examples.
+                            "-DSKIP_PERFORMANCE_COMPARISON=ON"
+                            "-DBUILD_SANDBOX=OFF")
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'install 'install-doc
+            (lambda _
+              (let ((doc (string-append #$output "/share/doc/html")))
+                (invoke "make" "doc")
+                (mkdir-p doc)
+                (copy-recursively "doc/html" doc)))))))
     (native-inputs
      (list doxygen))
     (home-page "https://uscilab.github.io/cereal/";)
@@ -168,6 +169,33 @@ arbitrary data types and reversibly turns them into 
different representations,
 such as compact binary encodings, XML, or JSON.")
     (license license:bsd-3)))
 
+;; Some packages fail with the latest version.  Remove this variable
+;; when unused.
+(define-public cereal-1.3.0
+  (package
+    (inherit cereal)
+    (version "1.3.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/USCiLab/cereal";)
+             (commit (string-append "v" version))))
+       (file-name (git-file-name "cereal" version))
+       (sha256
+        (base32
+         "0hc8wh9dwpc1w1zf5lfss4vg5hmgpblqxbrpp1rggicpx9ar831p"))))
+    (arguments
+     (substitute-keyword-arguments (package-arguments cereal)
+       ((#:configure-flags flags #~'())
+        #~'("-DSKIP_PORTABILITY_TEST=ON"))
+       ((#:phases phases #~%standard-phases)
+        #~(modify-phases #$phases
+            (add-before 'configure 'skip-sandbox
+              (lambda _
+                (substitute* "CMakeLists.txt"
+                  (("add_subdirectory\\(sandbox\\)") ""))))))))))
+
 (define-public msgpack
   (package
     (name "msgpack")