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03/03: gnu: Add r-seuratwrappers.
From: |
guix-commits |
Subject: |
03/03: gnu: Add r-seuratwrappers. |
Date: |
Thu, 27 Oct 2022 09:07:42 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 358a1fdf7b388ed1047d82bf7522752b5bf29e18
Author: Hong.Li@mdc-berlin.de <Hong.Li@mdc-berlin.de>
AuthorDate: Tue Oct 25 13:42:36 2022 +0000
gnu: Add r-seuratwrappers.
* gnu/packages/bioinformatics.scm (r-seuratwrappers): New variable.
---
gnu/packages/bioinformatics.scm | 38 ++++++++++++++++++++++++++++++++++++++
1 file changed, 38 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 65feff9528..da57868284 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -14211,6 +14211,44 @@ information... The package can also be used to
extract data from @code{.loom}
files.")
(license license:expat))))
+(define-public r-seuratwrappers
+ ;; There are no releases or tags.
+ (let ((commit "d28512f804d5fe05e6d68900ca9221020d52cf1d")
+ (revision "1"))
+ (package
+ (name "r-seuratwrappers")
+ (version (git-version "0.3.1" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/satijalab/seurat-wrappers")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0rm74y2fj3cmiqn7jz1ald8jbw53c2qxkj3mgl4pxih9vx39jhgy"))))
+ (properties `((upstream-name . "SeuratWrappers")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocmanager
+ r-cowplot
+ r-ggplot2
+ r-igraph
+ r-matrix
+ r-remotes
+ r-rlang
+ r-rsvd
+ r-r-utils
+ r-seurat))
+ (home-page "https://github.com/satijalab/seurat-wrappers")
+ (synopsis "Community-provided methods and extensions for the Seurat
object")
+ (description
+ "SeuratWrappers is a collection of community-provided methods and
+extensions for Seurat, curated by the Satija Lab at NYGC. These methods
+comprise functionality not presently found in Seurat, and are able to be
+updated much more frequently.")
+ (license license:gpl3))))
+
(define-public python-ctxcore
(package
(name "python-ctxcore")