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09/10: gnu: Add r-asgsca.
From: |
guix-commits |
Subject: |
09/10: gnu: Add r-asgsca. |
Date: |
Thu, 27 Oct 2022 10:40:55 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 695d7720efbe72f03227a84ce557eb1a4f37d4fa
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Wed Jun 22 16:07:05 2022 +0200
gnu: Add r-asgsca.
* gnu/packages/bioconductor.scm (r-asgsca): New variable.
---
gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 375104648b..2ace372c58 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2317,6 +2317,29 @@ reproducible gene expression signatures capable of
accurately distinguishing
tumor samples from healthy controls.")
(license license:artistic2.0)))
+(define-public r-asgsca
+ (package
+ (name "r-asgsca")
+ (version "1.30.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ASGSCA" version))
+ (sha256
+ (base32
+ "0mxrrkm2lg7gxjh8ynn6qmryn8wqda7b83sr51dpgblay83jcbaq"))))
+ (properties `((upstream-name . "ASGSCA")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-mass r-matrix))
+ (home-page "https://bioconductor.org/packages/ASGSCA")
+ (synopsis "Analysis of associations between multiple genotypes and traits")
+ (description
+ "The package @dfn{ASGSCA} (Association Study using Generalized Structured
+Component Analysis) provides tools to model and test the association between
+multiple genotypes and multiple traits, taking into account the prior
+biological knowledge. Genes, and clinical pathways are incorporated in the
+model as latent variables.")
+ (license license:gpl3)))
+
(define-public r-aspli
(package
(name "r-aspli")
- branch master updated (d9686315bd -> aef2425666), guix-commits, 2022/10/27
- 05/10: gnu: Add r-atena., guix-commits, 2022/10/27
- 04/10: gnu: Add r-atsnp., guix-commits, 2022/10/27
- 09/10: gnu: Add r-asgsca.,
guix-commits <=
- 03/10: gnu: Add r-attract., guix-commits, 2022/10/27
- 07/10: gnu: Add r-assessorf., guix-commits, 2022/10/27
- 10/10: gnu: Add r-aseb., guix-commits, 2022/10/27
- 08/10: gnu: Add r-aspli., guix-commits, 2022/10/27
- 06/10: gnu: Add r-asset., guix-commits, 2022/10/27
- 01/10: gnu: Add r-awst., guix-commits, 2022/10/27
- 02/10: gnu: Add r-awfisher., guix-commits, 2022/10/27