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09/10: gnu: Add r-asgsca.


From: guix-commits
Subject: 09/10: gnu: Add r-asgsca.
Date: Thu, 27 Oct 2022 10:40:55 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit 695d7720efbe72f03227a84ce557eb1a4f37d4fa
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Wed Jun 22 16:07:05 2022 +0200

    gnu: Add r-asgsca.
    
    * gnu/packages/bioconductor.scm (r-asgsca): New variable.
---
 gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 375104648b..2ace372c58 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2317,6 +2317,29 @@ reproducible gene expression signatures capable of 
accurately distinguishing
 tumor samples from healthy controls.")
     (license license:artistic2.0)))
 
+(define-public r-asgsca
+  (package
+    (name "r-asgsca")
+    (version "1.30.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "ASGSCA" version))
+              (sha256
+               (base32
+                "0mxrrkm2lg7gxjh8ynn6qmryn8wqda7b83sr51dpgblay83jcbaq"))))
+    (properties `((upstream-name . "ASGSCA")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-mass r-matrix))
+    (home-page "https://bioconductor.org/packages/ASGSCA";)
+    (synopsis "Analysis of associations between multiple genotypes and traits")
+    (description
+     "The package @dfn{ASGSCA} (Association Study using Generalized Structured
+Component Analysis) provides tools to model and test the association between
+multiple genotypes and multiple traits, taking into account the prior
+biological knowledge.  Genes, and clinical pathways are incorporated in the
+model as latent variables.")
+    (license license:gpl3)))
+
 (define-public r-aspli
   (package
     (name "r-aspli")



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