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branch master updated: gnu: Add r-metaneighbor.

From: guix-commits
Subject: branch master updated: gnu: Add r-metaneighbor.
Date: Thu, 01 Dec 2022 05:42:04 -0500

This is an automated email from the git hooks/post-receive script.

rekado pushed a commit to branch master
in repository guix.

The following commit(s) were added to refs/heads/master by this push:
     new a712c07d6a gnu: Add r-metaneighbor.
a712c07d6a is described below

commit a712c07d6ada1160855c583556e854ccb48c47e1
Author: Mădălin Ionel Patrașcu <>
AuthorDate: Tue Nov 29 09:00:56 2022 +0100

    gnu: Add r-metaneighbor.
    * gnu/packages/bioconductor.scm (r-metaneighbor): New variable.
 gnu/packages/bioconductor.scm | 36 ++++++++++++++++++++++++++++++++++++
 1 file changed, 36 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 62fb7cfcf8..c62c5970b8 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6010,6 +6010,42 @@ reduction (between group analysis) and joint dimension 
reduction of two
 datasets (coinertia analysis).")
     (license license:artistic2.0)))
+(define-public r-metaneighbor
+  (package
+    (name "r-metaneighbor")
+    (version "1.18.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "MetaNeighbor" version))
+              (sha256
+               (base32
+                "1gjjp5qlmv26sd3fvrd8cgv3invckxr8ldjpizpqm4mxjzifxwpm"))))
+    (properties `((upstream-name . "MetaNeighbor")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-beanplot
+           r-dplyr
+           r-ggplot2
+           r-gplots
+           r-igraph
+           r-matrix
+           r-matrixstats
+           r-rcolorbrewer
+           r-singlecellexperiment
+           r-summarizedexperiment
+           r-tibble
+           r-tidyr))
+    (native-inputs (list r-knitr))
+    (home-page "";)
+    (synopsis "Single cell replicability analysis")
+    (description
+     "This package implements a method to rapidly assess cell type identity 
+both functional and random gene sets and it allows users to quantify cell type
+replicability across datasets using neighbor voting.  @code{MetaNeighbor} works
+on the basis that cells of the same type should have more similar gene 
+profiles than cells of different types.")
+    (license license:expat)))
 (define-public r-methylkit
     (name "r-methylkit")

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