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09/15: gnu: python-biopython: Update to 1.80.
From: |
guix-commits |
Subject: |
09/15: gnu: python-biopython: Update to 1.80. |
Date: |
Sat, 10 Dec 2022 08:59:04 -0500 (EST) |
rekado pushed a commit to branch wip-python-graphviz
in repository guix.
commit 3f9c7d2abb2ce94274b8fe686f4cce23881b1ad8
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Dec 8 23:14:15 2022 +0100
gnu: python-biopython: Update to 1.80.
* gnu/packages/bioinformatics.scm (python-biopython): Update to 1.80.
[build-system]: Use pyproject-build-system.
[arguments]: Remove trailing #T from build phase.
---
gnu/packages/bioinformatics.scm | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 207f3c3d28..52abe152ee 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1237,21 +1237,21 @@ sequencing.")
(define-public python-biopython
(package
(name "python-biopython")
- (version "1.76")
+ (version "1.80")
(source (origin
(method url-fetch)
;; use PyPi rather than biopython.org to ease updating
(uri (pypi-uri "biopython" version))
(sha256
(base32
- "0wlch9xpa0fpgjzyxi6jsfca6iakaq9a05927xg8vqnmvaccnwrq"))))
- (build-system python-build-system)
+ "0hqf3jsxn2sphcx81fx7x3i69sarpjsi70fzw98f8rw7z2d5x02j"))))
+ (build-system pyproject-build-system)
(arguments
- `(#:phases
+ '(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-home
;; Some tests require a home directory to be set.
- (lambda _ (setenv "HOME" "/tmp") #t)))))
+ (lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs
(list python-numpy))
(home-page "https://biopython.org/")
- 01/15: gnu: bioperl-minimal: Remove trailing #T from build phase., (continued)
- 01/15: gnu: bioperl-minimal: Remove trailing #T from build phase., guix-commits, 2022/12/10
- 03/15: gnu: Add python-cleanlab-1., guix-commits, 2022/12/10
- 07/15: gnu: python-graphviz: Update to 0.20.1., guix-commits, 2022/12/10
- 10/15: gnu: python-hicmatrix: Update to 16., guix-commits, 2022/12/10
- 13/15: gnu: python-dna-features-viewer: Update to 3.1.1., guix-commits, 2022/12/10
- 02/15: gnu: Add python-cleanlab., guix-commits, 2022/12/10
- 06/15: gnu: Add python-fit-nbinom., guix-commits, 2022/12/10
- 08/15: gnu: python-hyperopt: Update to 0.2.7., guix-commits, 2022/12/10
- 12/15: gnu: python-hicexplorer: Update to 3.7.2., guix-commits, 2022/12/10
- 15/15: gnu: u-boot: Use plain list of inputs., guix-commits, 2022/12/10
- 09/15: gnu: python-biopython: Update to 1.80.,
guix-commits <=
- 11/15: gnu: python-pygenometracks: Update to 3.5., guix-commits, 2022/12/10
- 14/15: gnu: u-boot: Update to 2022.10., guix-commits, 2022/12/10