branch master updated (75331dc6e6 -> e84042fdd4)

[guix-commits]

rekado pushed a change to branch master
in repository guix.

    from 75331dc6e6 gnu: python-anndata: Use pyproject-build-system.
     new 3d388fe3d0 gnu: python-graphviz: Update to 0.20.1.
     new de70f957b2 gnu: python-hyperopt: Update to 0.2.7.
     new 5167881a60 gnu: python-biopython: Update to 1.80.
     new 6e9518e201 gnu: python-hicmatrix: Update to 16.
     new c3e330cf36 gnu: python-pygenometracks: Update to 3.5.
     new b66b6bdf70 gnu: python-hicexplorer: Update to 3.7.2.
     new b72df3bbb3 gnu: python-dna-features-viewer: Update to 3.1.1.
     new 08b9e29d46 gnu: python-bokeh: Skip failing PIL test.
     new 2f1d8fb129 gnu: python-apsw: Update to 3.40.0.0.
     new 461dff2651 gnu: python-cgatcore: Update to 0.6.14.
     new 71dc990f22 gnu: python-flask-restful: Update to 0.3.9.
     new 0fcba8b01c gnu: python-marshmallow: Update to 3.19.0.
     new 99a29b4933 gnu: python-apispec: Update to 6.0.2.
     new 8c197f990b gnu: python-pyjwt: Update to 2.6.0.
     new 9bf2101049 gnu: python-flasgger: Update to 0.9.5.
     new 1369b53d49 gnu: seqmagick: Update to 0.8.4.
     new e84042fdd4 gnu: cnvkit: Update to 0.9.9.

The 17 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 gnu/local.mk                                       |   2 -
 gnu/packages/bioinformatics.scm                    | 247 +++++++++++++++------
 gnu/packages/databases.scm                         |  36 +--
 gnu/packages/graphviz.scm                          |  23 +-
 gnu/packages/machine-learning.scm                  |  36 +--
 .../patches/python-apsw-3.39.2.1-test-fix.patch    |  27 ---
 .../python-flask-restful-werkzeug-compat.patch     |  36 ---
 gnu/packages/python-web.scm                        |  31 +--
 gnu/packages/python-xyz.scm                        | 130 ++++++-----
 9 files changed, 316 insertions(+), 252 deletions(-)
 delete mode 100644 gnu/packages/patches/python-apsw-3.39.2.1-test-fix.patch
 delete mode 100644 
gnu/packages/patches/python-flask-restful-werkzeug-compat.patch