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07/39: gnu: r-deseq2: Update to 1.38.2.
From: |
guix-commits |
Subject: |
07/39: gnu: r-deseq2: Update to 1.38.2. |
Date: |
Tue, 20 Dec 2022 06:11:51 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit db6ae57157506b1396641c9f6360483ec226d54c
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Mon Dec 19 22:59:57 2022 +0100
gnu: r-deseq2: Update to 1.38.2.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.38.2.
[propagated-inputs]: Remove r-genefilter; add r-matrixstats.
---
gnu/packages/bioconductor.scm | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 51ccb1a6f1..f1e875633f 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5364,26 +5364,26 @@ distribution.")
(define-public r-deseq2
(package
(name "r-deseq2")
- (version "1.38.1")
+ (version "1.38.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "DESeq2" version))
(sha256
(base32
- "0xp3rfhwn8k1bqzqnjzjqlaq8lqyad7kqjhb29vkbxgzjvafvxmk"))))
+ "1m81yvcl63h5m7kbbxpjk7hzygxmn4l9mlgqrdmnnls56183h3b4"))))
(properties `((upstream-name . "DESeq2")))
(build-system r-build-system)
(propagated-inputs
(list r-biobase
r-biocgenerics
r-biocparallel
- r-genefilter
r-geneplotter
r-genomicranges
r-ggplot2
r-iranges
r-locfit
+ r-matrixstats
r-rcpp
r-rcpparmadillo
r-s4vectors
- 01/39: gnu: r-ancombc: Update to 2.0.2., (continued)
- 01/39: gnu: r-ancombc: Update to 2.0.2., guix-commits, 2022/12/20
- 02/39: gnu: r-bambu: Update to 3.0.5., guix-commits, 2022/12/20
- 15/39: gnu: r-scmap: Update to 1.20.1., guix-commits, 2022/12/20
- 16/39: gnu: r-tximport: Update to 1.26.1., guix-commits, 2022/12/20
- 06/39: gnu: r-biocparallel: Update to 1.32.4., guix-commits, 2022/12/20
- 22/39: gnu: r-linnorm: Update to 2.22.1., guix-commits, 2022/12/20
- 09/39: gnu: r-genefilter: Update to 1.80.2., guix-commits, 2022/12/20
- 11/39: gnu: r-genomicfeatures: Update to 1.50.3., guix-commits, 2022/12/20
- 17/39: gnu: r-oligo: Update to 1.62.1., guix-commits, 2022/12/20
- 28/39: gnu: r-rsubread: Update to 2.12.2., guix-commits, 2022/12/20
- 07/39: gnu: r-deseq2: Update to 1.38.2.,
guix-commits <=
- 04/39: gnu: r-damefinder: Update to 1.10.1., guix-commits, 2022/12/20
- 08/39: gnu: r-edger: Update to 3.40.1., guix-commits, 2022/12/20
- 12/39: gnu: r-genomicranges: Update to 1.50.2., guix-commits, 2022/12/20
- 18/39: gnu: r-diffbind: Update to 3.8.3., guix-commits, 2022/12/20
- 19/39: gnu: r-glmgampoi: Update to 1.10.1., guix-commits, 2022/12/20
- 29/39: gnu: r-ggcyto: Update to 1.26.4., guix-commits, 2022/12/20
- 37/39: gnu: r-scran: Update to 1.26.1., guix-commits, 2022/12/20
- 31/39: gnu: r-rcistarget: Update to 1.18.2., guix-commits, 2022/12/20
- 27/39: gnu: r-iclusterplus: Update to 1.34.2., guix-commits, 2022/12/20
- 25/39: gnu: r-clusterexperiment: Update to 2.18.1., guix-commits, 2022/12/20