branch wip-guile-ssh-0.16 updated (f64c0f6979 -> d8abcffda5)

[guix-commits]

vagrantc pushed a change to branch wip-guile-ssh-0.16
in repository guix.

    from f64c0f6979 gnu: guix: Use 0 for revision.
     add 416f9141db gnu: linux-libre: Update to 6.0.14.
     add 6490835e4a gnu: linux-libre 5.15: Update to 5.15.84.
     add 0e0f54416f gnu: linux-libre 5.10: Update to 5.10.160.
     add bd6d76b8a4 gnu: linux-libre 5.4: Update to 5.4.228.
     add bbd11199e6 services:·kmscon:·Display·CJK·characters.
     add 2ad9bf1661 gnu: sfizz: Update to 1.2.0.
     add 851fbac0a9 gnu: sfizz: Improve package style.
     add 49b68c9842 gnu: emacs-eldev: Update to 1.3.1.
     add 9dbd12f629 gnu: Add emacs-fzf.
     add 326d485c29 gnu: emacs-posframe: Update to 1.3.2.
     add f5d53ac4ae gnu: emacs-rec-mode: Update to 1.9.1.
     add 50024eeef1 gnu: emacs-vertico-posframe: Update to 0.6.0.
     add 260743991f gnu: emacs-bfuture: Update to 1.0.2.
     add 69dade5bbf gnu: emacs-citeproc-el: Update to 0.9.2.
     add 1102b5de69 gnu: emacs-consult-notmuch: Update to 0.8.1.
     add f4e4e82483 gnu: emacs-org-contrib: Update to 0.4.1.
     add 64ed2e8380 gnu: r-ancombc: Update to 2.0.2.
     add d7fda90354 gnu: r-bambu: Update to 3.0.5.
     add 72f9c4312b gnu: r-bandits: Update to 1.14.1.
     add d2666970d1 gnu: r-damefinder: Update to 1.10.1.
     add e757936b96 gnu: r-deconvr: Update to 1.4.3.
     add 74be5ec3e8 gnu: r-biocparallel: Update to 1.32.4.
     add db6ae57157 gnu: r-deseq2: Update to 1.38.2.
     add 6af97fcc0e gnu: r-edger: Update to 3.40.1.
     add a71a89ac39 gnu: r-genefilter: Update to 1.80.2.
     add 86fcb20aa8 gnu: r-genomeinfodb: Update to 1.34.4.
     add a4362f4599 gnu: r-genomicfeatures: Update to 1.50.3.
     add b035f07cc2 gnu: r-genomicranges: Update to 1.50.2.
     add 53fb765c85 gnu: r-impute: Update to 1.72.2.
     add 5fc338637b gnu: r-lfa: Update to 1.28.1.
     add dc6f9ab3ab gnu: r-scmap: Update to 1.20.1.
     add 9e18e3a372 gnu: r-tximport: Update to 1.26.1.
     add a13f5a52d0 gnu: r-oligo: Update to 1.62.1.
     add c47fd0c47c gnu: r-diffbind: Update to 3.8.3.
     add 96508fa43a gnu: r-glmgampoi: Update to 1.10.1.
     add b51001141b gnu: r-dnacopy: Update to 1.72.2.
     add 2eb81c0888 gnu: r-lpsymphony: Update to 1.26.2.
     add ceffbc313f gnu: r-linnorm: Update to 2.22.1.
     add 7205384533 gnu: r-sigpathway: Update to 1.66.1.
     add 2e10df101f gnu: r-enrichplot: Update to 1.18.3.
     add da24c1c949 gnu: r-clusterexperiment: Update to 2.18.1.
     add 7f45db2df8 gnu: r-aucell: Update to 1.20.2.
     add 90b10b37e8 gnu: r-iclusterplus: Update to 1.34.2.
     add 5ac36a82e8 gnu: r-rsubread: Update to 2.12.2.
     add 7edcbf84bf gnu: r-ggcyto: Update to 1.26.4.
     add 031dbcbd0e gnu: r-opencyto: Update to 2.10.1.
     add fc617e70e6 gnu: r-rcistarget: Update to 1.18.2.
     add 18468f775e gnu: r-biocviews: Update to 1.66.1.
     add e895da0406 gnu: r-preprocesscore: Update to 1.60.1.
     add 68701917b8 gnu: r-s4vectors: Update to 0.36.1.
     add c4cbfa40d8 gnu: r-chromvar: Update to 1.20.1.
     add 71c115fd94 gnu: r-scuttle: Update to 1.8.3.
     add cfa8d448bc gnu: r-scran: Update to 1.26.1.
     add fd4ca4a266 gnu: r-kegggraph: Update to 1.58.3.
     add 4651d380b4 gnu: p2c: Update to 2.02.
     add e2b8cdde37 gnu: emacs-fzf: Fix version.
     add 040c43d78a gnu: Add edk2-tools.
     add 2f2a9aca4b gnu: Add ipxe-qemu.
     add 04665f2673 gnu: audacity: Be less alpha.
     add 1a3d8b9228 gnu: audacity: Update to 3.2.2.
     add f667aeb642 gnu: openjdk11: Update to 11.0.17.
     add c8ebfa0dd9 gnu: openjdk11: Fix find-files syntax.
     add 8a6316ef9e gnu: openjdk13: Update to 13.0.13.
     add 0175b93199 gnu: openjdk15: Update to 15.0.9.
     add 7cf6e66548 gnu: openjdk16: Update to 16.0.2.
     add a49e4087a1 gnu: openjdk17: Update to 17.0.5.
     add fc4eef7506 gnu: openjdk18: Update to 18.0.2.
     add 35530133ae Revert "gnu: QEMU: Unbundle SeaBIOS."
     add 7fb27b5441 gnu: seabios: Limit to i686-linux and x86_64-linux.
     add 680970490c tests: Adjust 'guix package' test to latest package search 
metrics.
     add 3f6c5c6f78 doc: Avoid 'match' on the <udev-configuration> record.
     add 2880dc3046 cpio: Skip test on inode numbers that don't fit on 32 bits.
     add 3011e8ae11 services: opensmtpd: Use 'match-record' instead of 'match'.
     add 00f48860e9 services: opensmtpd: Add 'shepherd-requirement' field.
     add fcc4e51e61 read-print: Add special forms.
     add 990da1af79 gnu: proj: Update to 9.1.1.
     add 12586fd0b8 gnu: libgeotiff: Apply patch for building against proj 
9.1.1.
     add 9c5c432f40 gnu: python-pyproj: Update to 3.4.0.
     add f912be4c12 gnu: python-cartopy: Update to 0.21.0.
     add d30ad6ff5c gnu: geos: Update to 3.11.1.
     add d8231432c5 gnu: gdal: Update to 3.6.1.
     add 3c6f7b53ce gnu: gdal: Add support for lz4 and openjpeg.
     add 25f702449c gnu: Merge gdal and python-gdal packages.
     new 0f8e17f615 Merge remote-tracking branch 'origin/master' into 
wip-guile-ssh-0.16
     new d8abcffda5 gnu: guix: Update to use guile-ssh 0.16.

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 doc/guix.texi                                      |  14 +-
 gnu/local.mk                                       |   1 +
 gnu/packages/audio.scm                             |  20 +--
 gnu/packages/bioconductor.scm                      | 173 ++++++++++-----------
 gnu/packages/bootloaders.scm                       |  58 ++++++-
 gnu/packages/databases.scm                         |   4 +-
 gnu/packages/emacs-xyz.scm                         |  60 +++++--
 gnu/packages/firmware.scm                          |  65 ++++++++
 gnu/packages/geo.scm                               |  65 ++++----
 gnu/packages/java.scm                              |  42 ++---
 gnu/packages/linux.scm                             |  16 +-
 gnu/packages/music.scm                             |  40 ++---
 gnu/packages/package-management.scm                |   4 +-
 gnu/packages/pascal.scm                            |  58 ++++---
 .../libgeotiff-fix-tests-with-proj-9.1.1.patch     | 100 ++++++++++++
 gnu/packages/virtualization.scm                    |  69 +-------
 gnu/services/base.scm                              |   4 +-
 gnu/services/mail.scm                              | 120 +++++++-------
 guix/read-print.scm                                |   2 +
 tests/cpio.scm                                     |  12 +-
 tests/guix-package.sh                              |   4 +-
 21 files changed, 562 insertions(+), 369 deletions(-)
 create mode 100644 
gnu/packages/patches/libgeotiff-fix-tests-with-proj-9.1.1.patch