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19/32: gnu: Add r-ggtreeextra.
From: |
guix-commits |
Subject: |
19/32: gnu: Add r-ggtreeextra. |
Date: |
Wed, 19 Jul 2023 09:55:46 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 15b35874b104723c5f1bf39a92469c43e514350f
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Wed Jul 19 15:09:03 2023 +0200
gnu: Add r-ggtreeextra.
* gnu/packages/bioconductor.scm (r-ggtreeextra): New variable.
---
gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
1 file changed, 30 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index af0f39aa8d..17ad509197 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -10619,6 +10619,36 @@ expressed genes in DNA microarray experiments.")
fitting of some classes of graphical Markov models.")
(license license:gpl2+)))
+(define-public r-ggtreeextra
+ (package
+ (name "r-ggtreeextra")
+ (version "1.10.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ggtreeExtra" version))
+ (sha256
+ (base32
+ "19xikly6ksh03kgpz35wj2d2gdbpikhrk71ahj9ghhkmlwdyjbcr"))))
+ (properties `((upstream-name . "ggtreeExtra")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-cli
+ r-ggnewscale
+ r-ggplot2
+ r-ggtree
+ r-magrittr
+ r-rlang
+ r-tidytree))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/YuLab-SMU/ggtreeExtra/")
+ (synopsis
+ "Add geometric layers On circular or other layout tree of ggtree")
+ (description
+ "ggtreeExtra extends the method for mapping and visualizing associated
+data on phylogenetic tree using ggtree. These associated data can be
+presented on the external panels to circular layout, fan layout, or other
+rectangular layout tree built by ggtree with the grammar of ggplot2.")
+ (license license:gpl3+)))
+
;; This is a CRAN package, but it depends on a bunch of Bioconductor packages.
(define-public r-ggpicrust2
(package
- 21/32: gnu: Add r-seqarray., (continued)
- 21/32: gnu: Add r-seqarray., guix-commits, 2023/07/19
- 23/32: gnu: Add r-tcgautils., guix-commits, 2023/07/19
- 28/32: import/utils: Add more initial words to beautify-description., guix-commits, 2023/07/19
- 29/32: gnu: Add r-rtcgatoolbox., guix-commits, 2023/07/19
- 10/32: gnu: Add r-tkwidgets., guix-commits, 2023/07/19
- 12/32: gnu: Add r-singscore., guix-commits, 2023/07/19
- 15/32: gnu: Add r-mfuzz., guix-commits, 2023/07/19
- 16/32: gnu: r-cellid: Move out of experiments section., guix-commits, 2023/07/19
- 18/32: gnu: Add r-survcomp., guix-commits, 2023/07/19
- 17/32: gnu: r-missmethyl: Move out of experiments section., guix-commits, 2023/07/19
- 19/32: gnu: Add r-ggtreeextra.,
guix-commits <=
- 22/32: gnu: Add r-globalancova., guix-commits, 2023/07/19
- 25/32: gnu: Add r-beaddatapackr., guix-commits, 2023/07/19
- 30/32: gnu: Add r-spectra., guix-commits, 2023/07/19
- 32/32: import/utils: beautify-description: Wrap class names in @code{...}., guix-commits, 2023/07/19
- 27/32: gnu: Add r-gwastools., guix-commits, 2023/07/19
- 31/32: gnu: Add r-qfeatures., guix-commits, 2023/07/19
- 26/32: gnu: Add r-beadarray., guix-commits, 2023/07/19