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30/32: gnu: Add r-spectra.
From: |
guix-commits |
Subject: |
30/32: gnu: Add r-spectra. |
Date: |
Wed, 19 Jul 2023 09:55:58 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 16a05db0ac8e9d405895e120f419ed25bb8d108d
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Wed Jul 19 15:26:13 2023 +0200
gnu: Add r-spectra.
* gnu/packages/bioconductor.scm (r-spectra): New variable.
---
gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 9cf7a522d1..73068bab4a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9714,6 +9714,37 @@ into features. These features can be processed with any
number of statistical
tools either included in speaq or available elsewhere on CRAN.")
(license license:asl2.0)))
+(define-public r-spectra
+ (package
+ (name "r-spectra")
+ (version "1.10.1")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "Spectra" version))
+ (sha256
+ (base32
+ "0vq5ha5m1vny7nrhgfmmkjd30zv0xaignp1a1m0xj08lnhkkmd69"))))
+ (properties `((upstream-name . "Spectra")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biocgenerics
+ r-biocparallel
+ r-fs
+ r-iranges
+ r-mscoreutils
+ r-protgenerics
+ r-s4vectors))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/RforMassSpectrometry/Spectra")
+ (synopsis "Spectra infrastructure for mass spectrometry data")
+ (description
+ "The Spectra package defines an efficient infrastructure for storing and
+handling mass spectrometry spectra and functionality to subset, process,
+visualize and compare spectra data. It provides different
+implementations (backends) to store mass spectrometry data. These comprise
+backends tuned for fast data access and processing and backends for very large
+data sets ensuring a small memory footprint.")
+ (license license:artistic2.0)))
+
(define-public r-stager
(package
(name "r-stager")
- 29/32: gnu: Add r-rtcgatoolbox., (continued)
- 29/32: gnu: Add r-rtcgatoolbox., guix-commits, 2023/07/19
- 10/32: gnu: Add r-tkwidgets., guix-commits, 2023/07/19
- 12/32: gnu: Add r-singscore., guix-commits, 2023/07/19
- 15/32: gnu: Add r-mfuzz., guix-commits, 2023/07/19
- 16/32: gnu: r-cellid: Move out of experiments section., guix-commits, 2023/07/19
- 18/32: gnu: Add r-survcomp., guix-commits, 2023/07/19
- 17/32: gnu: r-missmethyl: Move out of experiments section., guix-commits, 2023/07/19
- 19/32: gnu: Add r-ggtreeextra., guix-commits, 2023/07/19
- 22/32: gnu: Add r-globalancova., guix-commits, 2023/07/19
- 25/32: gnu: Add r-beaddatapackr., guix-commits, 2023/07/19
- 30/32: gnu: Add r-spectra.,
guix-commits <=
- 32/32: import/utils: beautify-description: Wrap class names in @code{...}., guix-commits, 2023/07/19
- 27/32: gnu: Add r-gwastools., guix-commits, 2023/07/19
- 31/32: gnu: Add r-qfeatures., guix-commits, 2023/07/19
- 26/32: gnu: Add r-beadarray., guix-commits, 2023/07/19