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[bug#32587] [PATCH] gnu: Add r-pore.
From: |
pimi |
Subject: |
[bug#32587] [PATCH] gnu: Add r-pore. |
Date: |
Thu, 30 Aug 2018 12:37:03 +0200 |
gnu/packages/bioinformatics.scm (r-pore): New variable
---
gnu/packages/bioinformatics.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 22a00894c..0605e4564 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -13558,3 +13558,30 @@ reference transcripts provided in a annotation file
(also in GTF/GFF3 format).
(list
license:expat ;license for gffcompare
license:artistic2.0))))) ;license for gclib
+
+(define-public r-pore
+ (package
+ (name "r-pore")
+ (version "0.24")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append
+
"https://sourceforge.net/projects/rpore/files/"version"/poRe_"version".tar.gz"))
+ (sha256
+ (base32 "0pih9nljbv8g4x8rkk29i7aqq681b782r5s5ynp4nw9yzqnmmksv"))))
+ (properties `((upstream-name . "poRe")))
+ (build-system r-build-system)
+ (native-inputs
+ `(("r-rhdf5" ,r-rhdf5)
+ ("r-shiny" ,r-shiny)
+ ("r-svdialogs" ,r-svdialogs)
+ ("r-data-table" ,r-data-table)
+ ("r-bit64" ,r-bit64)))
+ (home-page "https://sourceforge.net/projects/rpore/files/")
+ (synopsis "This R package enable visualisation of nanopore sequencing
data")
+ (description
+ "The Oxford Nanopore MinION is a revolutionary sequencer with a unique
model of data
+delivery, requiring novel tools for the novice user. This package enables
+organisation and visualisation of MinION data.")
+ (license license:gpl3)))
--
2.17.1
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