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[bug#55424] [PATCH 066/602] gnu: Remove python2-fastlmm.
From: |
Maxim Cournoyer |
Subject: |
[bug#55424] [PATCH 066/602] gnu: Remove python2-fastlmm. |
Date: |
Sun, 15 May 2022 00:37:33 -0400 |
* gnu/packages/machine-learning.scm (python2-fastlmm): Delete variable.
---
gnu/packages/machine-learning.scm | 32 -------------------------------
1 file changed, 32 deletions(-)
diff --git a/gnu/packages/machine-learning.scm
b/gnu/packages/machine-learning.scm
index 02cd6b31aa..7b377c7d35 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -1415,38 +1415,6 @@ (define-public vowpal-wabbit
interactive learning.")
(license license:bsd-3)))
-(define-public python2-fastlmm
- (package
- (name "python2-fastlmm")
- (version "0.2.21")
- (source
- (origin
- (method url-fetch)
- (uri (pypi-uri "fastlmm" version ".zip"))
- (sha256
- (base32
- "1q8c34rpmwkfy3r4d5172pzdkpfryj561897z9r3x22gq7813x1m"))))
- (build-system python-build-system)
- (arguments
- `(#:tests? #f ; some test files are missing
- #:python ,python-2)) ; only Python 2.7 is supported
- (propagated-inputs
- (list python2-numpy
- python2-scipy
- python2-matplotlib
- python2-pandas
- python2-scikit-learn
- python2-pysnptools))
- (native-inputs
- (list unzip python2-cython python2-mock python2-nose))
- (home-page
"http://research.microsoft.com/en-us/um/redmond/projects/mscompbio/fastlmm/")
- (synopsis "Perform genome-wide association studies on large data sets")
- (description
- "FaST-LMM, which stands for Factored Spectrally Transformed Linear Mixed
-Models, is a program for performing both single-SNP and SNP-set genome-wide
-association studies (GWAS) on extremely large data sets.")
- (license license:asl2.0)))
-
(define-public python-hyperopt
(package
(name "python-hyperopt")
--
2.36.0
- [bug#55424] [PATCH 075/602] gnu: Remove lekha., (continued)
- [bug#55424] [PATCH 075/602] gnu: Remove lekha., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 023/602] gnu: Remove bamm., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 062/602] gnu: Remove python2-pandas., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 017/602] gnu: Remove ribodiff., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 013/602] gnu: Remove raul-devel., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 036/602] gnu: Remove python2-nose2., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 072/602] gnu: Remove omnitux., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 070/602] gnu: Remove python2-pickleshare., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 073/602] gnu: Remove childsplay., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 030/602] gnu: Remove python2-pbcore., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 066/602] gnu: Remove python2-fastlmm.,
Maxim Cournoyer <=
- [bug#55424] [PATCH 078/602] gnu: Remove python2-keepkey., Maxim Cournoyer, 2022/05/15
- [bug#55424] [PATCH 000/602] Purge Python 2 packages, Guillaume Le Vaillant, 2022/05/15