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R: segfault on exit after changeset : "clean up top-level variables.."
From: |
Marco Atzeri |
Subject: |
R: segfault on exit after changeset : "clean up top-level variables.." |
Date: |
Thu, 24 Dec 2009 07:51:07 +0000 (GMT) |
--- Gio 24/12/09, Riccardo Corradini ha scritto:
> I
> think this related to an update to the external libraries
> linked to dev octave.
> I had the same problems yesterday on ubuntu 9.10, but when
> I updated the whole set of libraries with apt-get
> update I restarted compilation and everything went fine.
> Hope this helps
> Respectfully
> Riccardo
Not the case here, the fault is repetitive.
I built various changesets until I found the one from which
I have the problem. The previous one worked fine.
Regards
Marco
>
> --- Mer 23/12/09, Marco Atzeri
> <address@hidden> ha scritto:
>
> Da: Marco Atzeri <address@hidden>
> Oggetto: segfault on exit after changeset : "clean up
> top-level variables.."
> A: address@hidden
> Data: Mercoledì 23 dicembre 2009, 14:13
>
> Hi Jaroslav,
> after your
>
> changeset 9981 692ab4eaf965
> "clean up top-level variables when exiting
> Octave"
>
> octave is segfaulting on exit on cygwin1-7.
> The changeset seems related to fltk and currently
> I am building without it, so could you check it ?
>
> Regards
> Marco
>
> ../octave/configure --libexecdir=/usr/lib
> --without-framework-opengl F77=gfortran-4 CXX=g++-4
> CPP=cpp-4 CC=gcc-4 LDFLAGS=-no-undefined FLIBS=-lgfortran
> lt_cv_deplibs_check_method=pass_all
>
> Octave is now configured for i686-pc-cygwin
>
> Source directory:
> ../octave
> Installation prefix:
> /usr/local
> C compiler:
> gcc-4 -mieee-fp -Wall -W
> -Wshadow -Wformat -g -O2
> C++ compiler:
> g++-4 -mieee-fp
> -I/usr/include/freetype2 -Wall -W -Wshadow
> -Wold-style-cast -Wformat -g -O2
> Fortran
> compiler:
> gfortran-4 -O -mieee-fp
> Fortran libraries:
> -lgfortran
> Glob libraries:
> Lex libraries:
> LIBS:
> -lwsock32
> -lm -lwsock32
>
> AMD CPPFLAGS:
> AMD LDFLAGS:
> AMD libraries:
> -lamd
> ARPACK libraries:
> -larpack
> BLAS libraries:
> -lblas
> CAMD CPPFLAGS:
> CAMD LDFLAGS:
> CAMD libraries:
> -lcamd
> CARBON libraries:
> CCOLAMD CPPFLAGS:
> CCOLAMD LDFLAGS:
> CCOLAMD libraries:
> -lccolamd
> CHOLMOD
> CPPFLAGS:
> CHOLMOD LDFLAGS:
> CHOLMOD libraries:
> -lcholmod
> COLAMD CPPFLAGS:
> COLAMD LDFLAGS:
> COLAMD libraries:
> -lcolamd
> CURL CPPFLAGS:
> CURL LDFLAGS:
> CURL libraries:
> -lcurl
> CXSPARSE CPPFLAGS:
> CXSPARSE LDFLAGS:
> CXSPARSE libraries:
> -lcxsparse
> DL libraries:
> FFTW3 CPPFLAGS:
> FFTW3 LDFLAGS:
> FFTW3 libraries:
> -lfftw3
> FFTW3F CPPFLAGS:
> FFTW3F LDFLAGS:
> FFTW3F libraries:
> -lfftw3f
> fontconfig CFLAGS:
> fontconfig LIBS:
> -lfontconfig -lexpat -lfreetype -lz
> -liconv
> FT2_CFLAGS:
> -I/usr/include/freetype2
> FT2_LIBS:
> -lfreetype -lz
> GLPK CPPFLAGS:
> GLPK LDFLAGS:
> GLPK libraries:
> -lglpk
> graphics CFLAGS:
> graphics LIBS:
> GraphicsMagick++
> CPPFLAGS: -I/usr/include/GraphicsMagick
> GraphicsMagick++ LDFLAGS:
> GraphicsMagick++ libraries: -lGraphicsMagick++
> -lGraphicsMagick
> HDF5 CPPFLAGS:
> HDF5 LDFLAGS:
> HDF5 libraries:
> -lhdf5
> LAPACK libraries:
> -llapack
> OPENGL libraries:
> -lfontconfig -lexpat -lfreetype -lz
> -liconv -L/usr/X11R6/lib -lGL
> -lGLU
> PTHREAD flags:
> PTHREAD libraries:
> QHULL CPPFLAGS:
> QHULL LDFLAGS:
> QHULL libraries:
> -lqhull
> QRUPDATE libraries:
> -lqrupdate
> READLINE libraries:
> -lreadline
> REGEX libraries:
> -L/usr/lib -lpcre
> TERM libraries:
> -lncurses
> TERM libraries:
> -lncurses
> UMFPACK libraries:
> -lumfpack
> X11 include flags:
> X11 libraries:
> -lX11
> Z CPPFLAGS:
> Z LDFLAGS:
> Z libraries:
> -lz
>
>
> Default pager:
> less
> gnuplot:
> gnuplot
>
> Do internal array bounds checking: false
> Build static libraries:
> false
> Build shared libraries:
> true
> Dynamic Linking:
> true (dlopen)
> Include support for GNU
> readline: true
> 64-bit array dims and indexing:
> false
>
> configure:39848: WARNING: "FLTK config script not
> found. Native graphics will be disabled."
> configure:39864: WARNING:
> configure:39866: WARNING: I didn't find the necessary
> libraries to compile native
> configure:39868: WARNING: graphics. It isn't necessary
> to have
> native graphics
> configure:39870: WARNING: but you will have to use gnuplot
> or you won't be able
> configure:39872: WARNING: to use any of Octave's
> plotting commands
> configure:39874: WARNING:
>
>
>
> Regards
> Marco
>
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