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Re: moving coefficient.[ch] and design-matrix.[ch]
From: |
John Darrington |
Subject: |
Re: moving coefficient.[ch] and design-matrix.[ch] |
Date: |
Wed, 11 Jun 2008 09:32:50 +0800 |
User-agent: |
Mutt/1.5.13 (2006-08-11) |
I'm worried that src/data is becoming a dumping ground for things
which don't fit elsewhere. At the same time, src/math is becoming
depleted.
I always envisaged src/data to be about the definition, storage and
access of data. The manipulation of data is, as I see it, a seperate,
higher level task.
J'
On Tue, Jun 10, 2008 at 01:45:30PM -0400, Jason Stover wrote:
I want to move coefficient.[ch] and design-matrix.[ch] to
src/data. Ben and I thought this might be a good idea after discussing
it on IRC, so I thought I would elicit more discussion here.
coefficient.[ch] and design-matrix.[ch] don't do any computations.
They're purpose to offer some common, data-shuffling functionality to
model-fitting procedures in src/math/. Right now the only
model-fitting code in src/math is linreg, but we will eventually want
code for logistic regression and other models. They all need design
matrices and coefficients to match variables to columns to
coefficients. That matching goes pretty much the same for each kind of
model.
So it seems that a model-fitting directory in src/math should depend
on coefficient.[ch] and design-matrix.[ch]. coefficient.[ch] and
design-matrix.[ch] probably should not have to know about
model-fitting: there are many kinds of models, and for each of them, a
coefficient means the same thing, and a design matrix means the same
thing, independently of what kind of model it is.
Furthermore, coefficients and design-matrix code doesn't have any math
in it. There is no linear algebra, or descent algorithms, etc. That
code just takes a coefficient and returns the variable it matches, or
vice versa, or takes a variable and finds its corresponding columns in
a design matrix. So putting this in src/math doesn't seem as
appropriate as putting it in a place like src/data.
coefficient.c depends on linreg.h, but that could be changed. By contrast,
design-matrix.c depends on src/data/category.h, and I don't think I could
eliminate this dependency.
So how does everyone feel about moving coefficient.[ch] and
design-matrix.[ch] to src/data? If it sounds good, I'll post a patch.
-Jason
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