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Error In Installing FreeBayes


From: Dr Priyanka Jain
Subject: Error In Installing FreeBayes
Date: Fri, 6 Mar 2020 09:38:19 +0530


Dear Sir/Madam,
                    
  I am trying to clone freebayes from following link :

To download freebayes, please use git to download the most recent development tr

    git clone --recursive git://github.com/ekg/freebayes.git


## Compilationfreebayes requires g++, camke, the standard C and C++ development libraries, lib
To build, users can just run:

    make -j4

Error i am getting is 

- Found LibLZMA: /home/sb-102/anaconda3/lib/liblzma.so (found version "5.2.4")
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_kill
-- Looking for pthread_kill - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /home/NFS/37_hg/freebayes/build
/usr/bin/gmake: unrecognized option '--jobserver-auth=3,4'
Usage: gmake [options] [target] ...
Options:
  -b, -m                      Ignored for compatibility.
  -B, --always-make           Unconditionally make all targets.
  -C DIRECTORY, --directory=DIRECTORY
                              Change to DIRECTORY before doing anything.
  -d                          Print lots of debugging information.
  --debug[=FLAGS]             Print various types of debugging information.
  -e, --environment-overrides
                              Environment variables override makefiles.
  --eval=STRING               Evaluate STRING as a makefile statement.
  -f FILE, --file=FILE, --makefile=FILE
                              Read FILE as a makefile.
  -h, --help                  Print this message and exit.
  -i, --ignore-errors         Ignore errors from recipes.
  -I DIRECTORY, --include-dir=DIRECTORY
                              Search DIRECTORY for included makefiles.
  -j [N], --jobs[=N]          Allow N jobs at once; infinite jobs with no arg.
  -k, --keep-going            Keep going when some targets can't be made.
  -l [N], --load-average[=N], --max-load[=N]
                              Don't start multiple jobs unless load is below N.
  -L, --check-symlink-times   Use the latest mtime between symlinks and target.
  -n, --just-print, --dry-run, --recon
                              Don't actually run any recipe; just print them.
  -o FILE, --old-file=FILE, --assume-old=FILE
                              Consider FILE to be very old and don't remake it.
  -p, --print-data-base       Print make's internal database.
  -q, --question              Run no recipe; exit status says if up to date.
  -r, --no-builtin-rules      Disable the built-in implicit rules.
  -R, --no-builtin-variables  Disable the built-in variable settings.
  -s, --silent, --quiet       Don't echo recipes.
  -S, --no-keep-going, --stop
                              Turns off -k.
  -t, --touch                 Touch targets instead of remaking them.
  -v, --version               Print the version number of make and exit.
  -w, --print-directory       Print the current directory.
  --no-print-directory        Turn off -w, even if it was turned on implicitly.
  -W FILE, --what-if=FILE, --new-file=FILE, --assume-new=FILE
                              Consider FILE to be infinitely new.
  --warn-undefined-variables  Warn when an undefined variable is referenced.
  --warn-undefined-functions  Warn when an undefined user function is called.

This program built for x86_64-redhat-linux-gnu
Report bugs to <address@hidden>
make: *** [Makefile:6: freebayes] Error 2

Kindly help me to resolve this error

With Regards,
Dr Priyanka Jain (PhD),
Mobile : 9718854136
Researcher,National Research Centre on Plant Biotechnology,
LBS Centre, Pusa Campus, New Delhi – 110012, INDIA







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