branch wip-r updated: gnu: pigx-chipseq: Fix build.

[guix-commits]

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rekado pushed a commit to branch wip-r
in repository guix.

The following commit(s) were added to refs/heads/wip-r by this push:
     new add551f651 gnu: pigx-chipseq: Fix build.
add551f651 is described below

commit add551f651cf6c2359baf5493c7a9d920b7d511d
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sun May 29 00:18:48 2022 +0200

    gnu: pigx-chipseq: Fix build.
    
    * gnu/packages/bioinformatics.scm (pigx-chipseq)[arguments]: Patch build
    system.
---
 gnu/packages/bioinformatics.scm | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 239a8c13df..ced3b642e9 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -11094,6 +11094,15 @@ expression report comparing samples in an easily 
configurable manner.")
        (modify-phases %standard-phases
          (add-before 'bootstrap 'autoreconf
            (lambda _
+             ;; This was fixed in commit
+             ;; 0b1c9f7f2e4d0ff601f1de95ab8b2953f4d5dbc7, but there is no
+             ;; release with this fix.
+             (call-with-output-file "VERSION"
+               (lambda (port) (display ,version port)))
+             ;; See https://github.com/BIMSBbioinfo/pigx_chipseq/issues/176
+             (substitute* "m4/ax_r_package.m4"
+               (("if\\(is.na\\(packageDescription\\(\"PKG\"\\)\\)\\)")
+                "if(system.file(package=\"PKG\") == \"\")"))
              (invoke "autoreconf" "-vif")))
          (add-before 'configure 'set-PYTHONPATH
            (lambda _