branch wip-bioconductor created (now f43a41d196)

[guix-commits]

rekado pushed a change to branch wip-bioconductor
in repository guix.

      at f43a41d196 gnu: r-scuttle: Update to 1.8.1.

This branch includes the following new commits:

     new f4a7ccc976 guix: Upgrade to Bioconductor 3.16.
     new 8105b3c09f gnu: Add r-hdo-db.
     new c70207ae3b gnu: r-ggplot2: Update to 3.4.0.
     new e273f52358 gnu: r-ggprism: Update to 1.0.4.
     new 3d073b86d3 gnu: Add r-biocbaseutils.
     new 176fd3b052 gnu: Add r-rorcid.
     new 8f67799a1b gnu: Add r-gson.
     new 349804b602 gnu: r-abarray: Update to 1.66.0.
     new f24085bfb3 gnu: r-absseq: Update to 1.52.0.
     new 38fc0acf4d gnu: r-adam: Update to 1.14.0.
     new a62284ad13 gnu: r-adamgui: Update to 1.14.0.
     new daf0729533 gnu: r-adimpute: Update to 1.8.0.
     new b772bc7f75 gnu: r-adsplit: Update to 1.68.0.
     new 69ecae7801 gnu: r-affixcan: Update to 1.16.0.
     new 014fc145f8 gnu: r-affyrnadegradation: Update to 1.44.0.
     new f74c670c7f gnu: r-agdex: Update to 1.46.0.
     new fc60b9dfe7 gnu: r-aggregatebiovar: Update to 1.8.0.
     new e153f4904d gnu: r-agilp: Update to 3.30.0.
     new 5d09a99174 gnu: r-adductomicsr: Update to 1.14.0.
     new fb7a1b340b gnu: r-agimicrorna: Update to 2.48.0.
     new f217ff6463 gnu: r-airpart: Update to 1.6.0.
     new c9c4d6b501 gnu: r-amountain: Update to 1.24.0.
     new ecb91b3404 gnu: r-amaretto: Update to 1.13.0.
     new 190ed5f137 gnu: r-anaquin: Update to 2.22.0.
     new eddbd27be5 gnu: r-aldex2: Update to 1.30.0.
     new cbeefda563 gnu: r-aneufinder: Update to 1.26.0.
     new d18f8e367e gnu: r-anf: Update to 1.20.0.
     new bc62494bc8 gnu: r-annmap: Update to 1.40.0.
     new 1114e837a9 gnu: r-antiprofiles: Update to 1.38.0.
     new 110f0f8483 gnu: r-aseb: Update to 1.42.0.
     new b89305c18d gnu: r-asgsca: Update to 1.32.0.
     new dfb78fd76e gnu: r-aspli: Update to 2.8.0.
     new 930fab74f2 gnu: r-assessorf: Update to 1.16.0.
     new a1dbd6b2da gnu: r-asset: Update to 2.16.0.
     new 110ac40dea gnu: r-atena: Update to 1.4.0.
     new f185d3f680 gnu: r-atsnp: Update to 1.14.0.
     new 381907d25d gnu: r-attract: Update to 1.50.0.
     new faddfa8aed gnu: r-awfisher: Update to 1.12.0.
     new 7bb05be10a gnu: r-awst: Update to 1.6.0.
     new e9a7c42deb gnu: r-baalchip: Update to 1.24.0.
     new 91d928706a gnu: r-basespacer: Update to 1.42.0.
     new 5fd038bd49 gnu: r-bac: Update to 1.58.0.
     new 25104e7a6b gnu: r-bader: Update to 1.36.0.
     new 5b4f7d11ae gnu: r-badregionfinder: Update to 1.26.0.
     new f07c0d00cd gnu: r-bambu: Update to 3.0.1.
     new f3038efb80 gnu: r-bandits: Update to 1.14.0.
     new c032441772 gnu: r-banocc: Update to 1.22.0.
     new 6af3770787 gnu: r-barcodetrackr: Update to 1.6.0.
     new 9e0e4bf347 gnu: r-biocversion: Update to 3.16.0.
     new 176e20a1f1 gnu: r-biocgenerics: Update to 0.44.0.
     new 2bfc463a42 gnu: r-coverageview: Update to 1.36.0.
     new f0ed6c519c gnu: r-cummerbund: Update to 2.40.0.
     new f5118505f7 gnu: r-dama: Update to 1.70.0.
     new 3a90895228 gnu: r-damefinder: Update to 1.10.0.
     new 00400127ef gnu: r-dearseq: Update to 1.10.0.
     new e3262cc2e1 gnu: r-debcam: Update to 1.16.0.
     new bd622e1464 gnu: r-decipher: Update to 2.26.0.
     new 483084b7f9 gnu: r-deco: Update to 1.13.0.
     new 8fd5bbc31e gnu: r-decomplexdisease: Update to 1.18.0.
     new 9b717bcad9 gnu: r-decomptumor2sig: Update to 2.14.0.
     new 36c940a4d7 gnu: r-deconrnaseq: Update to 1.40.0.
     new f7dd1e4552 gnu: r-decontam: Update to 1.18.0.
     new d3f0d2abe4 gnu: r-deconvr: Update to 1.4.0.
     new ef81f5f55e gnu: r-decoupler: Update to 2.4.0.
     new b8f0bf3e4d gnu: r-deepsnv: Update to 1.44.0.
     new 2e48b8b028 gnu: r-delayedarray: Update to 0.24.0.
     new c7bf9a1a58 gnu: r-derfinderhelper: Update to 1.32.0.
     new de72bdab94 gnu: r-drimseq: Update to 1.26.0.
     new 81ba7cc732 gnu: r-bluster: Update to 1.8.0.
     new 2564b7bcff gnu: r-ideoviz: Update to 1.34.0.
     new e73a833dd2 gnu: r-infercnv: Update to 1.14.0.
     new cc0464f530 gnu: r-iranges: Update to 2.32.0.
     new 4daec4dc4d gnu: r-isoformswitchanalyzer: Update to 1.20.0.
     new b7359c3b17 gnu: r-affy: Update to 1.76.0.
     new 7034dcc2d6 gnu: r-affycomp: Update to 1.74.0.
     new ceb39bfb39 gnu: r-affycompatible: Update to 1.58.0.
     new 6e2871262c gnu: r-affycontam: Update to 1.56.0.
     new 9947e412ac gnu: r-affycoretools: Update to 1.70.0.
     new 45c83ffbe5 gnu: r-affyio: Update to 1.68.0.
     new 261e3c12c2 gnu: r-affxparser: Update to 1.70.0.
     new dc8c3024c0 gnu: r-annotate: Update to 1.76.0.
     new 89f6d1d425 gnu: r-annotationdbi: Update to 1.60.0.
     new 748599dc6b gnu: r-annotationfilter: Update to 1.22.0.
     new 065fdc2bb1 gnu: r-annotationforge: Update to 1.40.0.
     new c5bcfef628 gnu: r-annotationhub: Update to 3.6.0.
     new 203ddafa09 gnu: r-aroma-light: Update to 3.28.0.
     new 822ad274c9 gnu: r-bamsignals: Update to 1.30.0.
     new a0d2db2e08 gnu: r-biobase: Update to 2.58.0.
     new 1ef39d3d28 gnu: r-biomart: Update to 2.54.0.
     new 9048d502da gnu: r-biocparallel: Update to 1.32.1.
     new 30f2fc13c6 gnu: r-biostrings: Update to 2.66.0.
     new 3e945a87e0 gnu: r-biovizbase: Update to 1.46.0.
     new bebf55cbd6 gnu: r-bsgenome: Update to 1.66.1.
     new 9d8107b4d7 gnu: r-category: Update to 2.64.0.
     new 32629c01ef gnu: r-chipseeker: Update to 1.34.0.
     new bfed8f183d gnu: r-chipseq: Update to 1.48.0.
     new ba197ae988 gnu: r-complexheatmap: Update to 2.14.0.
     new 539a39c4ef gnu: r-copywriter: Update to 2.29.0.
     new ecd3d1ca63 gnu: r-deseq2: Update to 1.38.1.
     new 16973c9796 gnu: r-dexseq: Update to 1.44.0.
     new 1e5a6a9fb2 gnu: r-diffcyt: Update to 1.18.0.
     new 0d9a766fa7 gnu: r-dirichletmultinomial: Update to 1.40.0.
     new 3a15509cb6 gnu: r-dittoseq: Update to 1.10.0.
     new bd76f479de gnu: r-edaseq: Update to 2.32.0.
     new 4eb513e7df gnu: r-edger: Update to 3.40.0.
     new aad9a5337c gnu: r-ensembldb: Update to 2.22.0.
     new 3ff9f819f7 gnu: r-fastseg: Update to 1.44.0.
     new 0c1edd86f2 gnu: r-gage: Update to 2.48.0.
     new b6117c1837 gnu: r-genefilter: Update to 1.80.0.
     new 533a3d9914 gnu: r-geneoverlap: Update to 1.34.0.
     new 4e501fbb67 gnu: r-genomation: Update to 1.30.0.
     new c7c3bfa250 gnu: r-genomeinfodb: Update to 1.34.3.
     new d7e456cc13 gnu: r-genomicalignments: Update to 1.34.0.
     new f2910e5604 gnu: r-genomicfeatures: Update to 1.50.2.
     new 437ad93ce7 gnu: r-genomicfiles: Update to 1.34.0.
     new 169c0b7fa1 gnu: r-genomicranges: Update to 1.50.1.
     new 25c5901adc gnu: r-gostats: Update to 2.64.0.
     new 60724024de gnu: r-gseabase: Update to 1.60.0.
     new aa0e18c1be gnu: r-hpar: Update to 1.40.0.
     new ce2688cd3b gnu: r-rhtslib: Update to 2.0.0.
     new aa25663162 gnu: r-impute: Update to 1.72.1.
     new 1ba8e9e75c gnu: r-interactivedisplaybase: Update to 1.36.0.
     new 6bf50ca57a gnu: r-keggrest: Update to 1.38.0.
     new 413f96c95f gnu: r-lfa: Update to 1.28.0.
     new 0a699ea182 gnu: r-limma: Update to 3.54.0.
     new 4fd64b03b4 gnu: r-made4: Update to 1.72.0.
     new fa0eda6e3f gnu: r-methylkit: Update to 1.24.0.
     new cb7e5ebd54 gnu: r-muscat: Update to 1.12.0.
     new a7936348db gnu: r-mutationalpatterns: Update to 3.8.0.
     new 66edbf1635 gnu: r-msnbase: Update to 2.24.0.
     new 57ae5f7196 gnu: r-msnid: Update to 1.32.0.
     new 8735f10995 gnu: r-mzid: Update to 1.36.0.
     new 0fbb12153b gnu: r-mzr: Update to 2.32.0.
     new 66f1939df5 gnu: r-organism-dplyr: Update to 1.26.0.
     new 7c8829ae33 gnu: r-organismdbi: Update to 1.40.0.
     new 34b615e3e7 gnu: r-pcaexplorer: Update to 2.24.0.
     new cf106821f5 gnu: r-pcamethods: Update to 1.90.0.
     new dd27fffd32 gnu: r-protgenerics: Update to 1.30.0.
     new 4e861e7f9a gnu: r-rbgl: Update to 1.74.0.
     new b7ec827477 gnu: r-rcas: Update to 1.24.0.
     new 607eae1e56 gnu: r-regioner: Update to 1.30.0.
     new c45dc1e273 gnu: r-reportingtools: Update to 2.38.0.
     new dfec056be2 gnu: r-rhdf5: Update to 2.42.0.
     new a7afc50aa3 gnu: r-rhdf5filters: Update to 1.10.0.
     new 39c52a42bd gnu: r-rsamtools: Update to 2.14.0.
     new 855ea2a8f1 gnu: r-rtracklayer: Update to 1.58.0.
     new d6fac1138f gnu: r-scannotatr: Update to 1.4.0.
     new 4d8a2f5562 gnu: r-scdblfinder: Update to 1.12.0.
     new 6fb3733394 gnu: r-scmap: Update to 1.20.0.
     new 0685695155 gnu: r-scry: Update to 1.10.0.
     new 59e810b232 gnu: r-seqlogo: Update to 1.64.0.
     new 1ca80ed5a5 gnu: r-seqpattern: Update to 1.30.0.
     new 94af5e4e96 gnu: r-shortread: Update to 1.56.0.
     new e5e22f3352 gnu: r-simplifyenrichment: Update to 1.8.0.
     new 2c821d2ce5 gnu: r-transcriptr: Update to 1.26.0.
     new c07b603d64 gnu: r-trajectoryutils: Update to 1.6.0.
     new e4e4b97a67 gnu: r-slingshot: Update to 2.6.0.
     new 3f307e6ebc gnu: r-stager: Update to 1.20.0.
     new 3b89c301db gnu: r-stringdb: Update to 2.10.0.
     new f87a87eee8 gnu: r-structuralvariantannotation: Update to 1.13.0.
     new ab4f54d5f9 gnu: r-summarizedexperiment: Update to 1.28.0.
     new adedfb51fa gnu: r-sva: Update to 3.46.0.
     new 8ded00c7da gnu: r-systempiper: Update to 2.4.0.
     new 88440606c7 gnu: r-topgo: Update to 2.50.0.
     new c1790d17fc gnu: r-tximport: Update to 1.26.0.
     new 9501ec8c4c gnu: r-variantannotation: Update to 1.44.0.
     new 32afcf9b90 gnu: r-vsn: Update to 3.66.0.
     new e03bff40fc gnu: r-xina: Update to 1.16.0.
     new 8fe91b692a gnu: r-xmapbridge: Update to 1.56.0.
     new 9a707db7ee gnu: r-xvector: Update to 0.38.0.
     new 7a0c779a91 gnu: r-zlibbioc: Update to 1.44.0.
     new 44ec429d48 gnu: r-zellkonverter: Update to 1.8.0.
     new 7db100f21f gnu: r-geneplotter: Update to 1.76.0.
     new 4fba8d9d7c gnu: r-oligoclasses: Update to 1.60.0.
     new c05ab72966 gnu: r-oligo: Update to 1.62.0.
     new 11c4bc08db gnu: r-qvalue: Update to 2.30.0.
     new 9bb55dfa8d gnu: r-apeglm: Update to 1.20.0.
     new 6f68e3f42d gnu: r-greylistchip: Update to 1.30.0.
     new c5b6670167 gnu: r-diffbind: Update to 3.8.1.
     new d4d9ce2801 gnu: r-mbkmeans: Update to 1.14.0.
     new 77d10366d4 gnu: r-multtest: Update to 2.54.0.
     new 7a11e32dae gnu: r-graph: Update to 1.76.0.
     new 73add01b22 gnu: r-chippeakanno: Update to 3.32.0.
     new 03862582db gnu: r-matrixgenerics: Update to 1.10.0.
     new 78d4b00882 gnu: r-marray: Update to 1.76.0.
     new 67799955b4 gnu: r-cghbase: Update to 1.58.0.
     new 564afa20fb gnu: r-cghcall: Update to 2.60.0.
     new 7803ed86fe gnu: r-qdnaseq: Update to 1.34.0.
     new 721c125de4 gnu: r-bayseq: Update to 2.31.0.
     new 5d32e4a62a gnu: r-chipcomp: Update to 1.28.0.
     new a0465bd116 gnu: r-riboprofiling: Update to 1.28.0.
     new e4ab1ac23e gnu: r-riboseqr: Update to 1.32.0.
     new e7393c32f4 gnu: r-interactionset: Update to 1.26.0.
     new 8d62cfc7d1 gnu: r-genomicinteractions: Update to 1.32.0.
     new 74852cb46d gnu: r-ctc: Update to 1.72.0.
     new 7bf9521e85 gnu: r-goseq: Update to 1.50.0.
     new 9b615c408f gnu: r-glimma: Update to 2.8.0.
     new 870a334f6d gnu: r-rots: Update to 1.26.0.
     new 83ff82481c gnu: r-plgem: Update to 1.70.0.
     new 45616713a7 gnu: r-inspect: Update to 1.28.0.
     new 7146ee20d9 gnu: r-dnabarcodes: Update to 1.28.0.
     new c3b6219435 gnu: r-ruvseq: Update to 1.32.0.
     new ccd857d8cf gnu: r-biocneighbors: Update to 1.16.0.
     new b711b25c09 gnu: r-scaledmatrix: Update to 1.6.0.
     new 0bb3b953eb gnu: r-treeio: Update to 1.22.0.
     new 3e7dbe7804 gnu: r-ggtree: Update to 3.6.2.
     new c4df4af6ba gnu: r-metapod: Update to 1.6.0.
     new c733f330e1 gnu: r-biocsingular: Update to 1.14.0.
     new 1517a8fd4f gnu: r-destiny: Update to 3.12.0.
     new 1dfad3e535 gnu: r-savr: Update to 1.36.0.
     new c7f24274bf gnu: r-chipexoqual: Update to 1.22.0.
     new 3a731c1b28 gnu: r-copynumber: Update to 1.38.0.
     new 9fcaa4e3d8 gnu: r-dnacopy: Update to 1.72.0.
     new c9dc9b10e8 gnu: r-ebseq: Update to 1.38.0.
     new f60faec932 gnu: r-karyoploter: Update to 1.24.0.
     new e8e7990b88 gnu: r-lpsymphony: Update to 1.26.0.
     new 3a9e82f0f5 gnu: r-ihw: Update to 1.26.0.
     new 29f0a198a5 gnu: r-icobra: Update to 1.26.0.
     new 2896e9005e gnu: r-residualmatrix: Update to 1.8.0.
     new 9f49e6eee8 gnu: r-batchelor: Update to 1.14.0.
     new f149c694fd gnu: r-mast: Update to 1.24.0.
     new 9ddd0a0ab4 gnu: r-monocle: Update to 2.26.0.
     new 70a1e54b8b gnu: r-noiseq: Update to 2.42.0.
     new 7030f66362 gnu: r-scdd: Update to 1.22.0.
     new d00553da9b gnu: r-scone: Update to 1.22.0.
     new 62c58299a2 gnu: r-geoquery: Update to 2.66.0.
     new e3d4563b4f gnu: r-illuminaio: Update to 0.40.0.
     new 734d40892a gnu: r-siggenes: Update to 1.72.0.
     new a4e446a3a3 gnu: r-bumphunter: Update to 1.40.0.
     new 3c1854108e gnu: r-microbiome: Update to 1.20.0.
     new 59fe138fcc gnu: r-milor: Update to 1.6.0.
     new 44a5942ce7 gnu: r-minfi: Update to 1.44.0.
     new 6b9cb6256a gnu: r-methylumi: Update to 2.44.0.
     new 8bd75d3ef7 gnu: r-lumi: Update to 2.50.0.
     new e0b3d2dda9 gnu: r-linnorm: Update to 2.22.0.
     new 4c30f1a5b5 gnu: r-ioniser: Update to 2.22.0.
     new 5c2e048789 gnu: r-tradeseq: Update to 1.12.0.
     new 69eb260b6f gnu: r-varianttools: Update to 1.40.0.
     new 83fa503de3 gnu: r-heatplus: Update to 3.6.0.
     new 9171e09d37 gnu: r-gosemsim: Update to 2.24.0.
     new 368fdb0850 gnu: r-anota: Update to 1.46.0.
     new e392bcce64 gnu: r-sigpathway: Update to 1.66.0.
     new 245ab82522 gnu: r-fcscan: Update to 1.12.0.
     new 11b8f6caf0 gnu: r-fgsea: Update to 1.24.0.
     new 56fe119257 gnu: r-dose: Update to 3.24.1.
     new 7d70375aa7 gnu: r-enrichplot: Update to 1.18.1.
     new 26a4a1e36b gnu: r-clusterprofiler: Update to 4.6.0.
     new c5c2cbe1e3 gnu: r-clusterexperiment: Update to 2.18.0.
     new ed0238c59e gnu: r-mlinterfaces: Update to 1.78.0.
     new e8dc5aec69 gnu: r-annaffy: Update to 1.70.0.
     new e65450cc4c gnu: r-a4core: Update to 1.46.0.
     new 94a665b347 gnu: r-a4classif: Update to 1.46.0.
     new 0b89230af3 gnu: r-a4preproc: Update to 1.46.0.
     new 9e1a4ae173 gnu: r-a4reporting: Update to 1.46.0.
     new a618ee00cd gnu: r-a4base: Update to 1.46.0.
     new 8a11bd2c1e gnu: r-a4: Update to 1.46.0.
     new e09f43a15d gnu: r-abseqr: Update to 1.16.0.
     new 621c91564d gnu: r-bacon: Update to 1.26.0.
     new bdd122be57 gnu: r-rgadem: Update to 2.46.0.
     new 5fd930a771 gnu: r-motifdb: Update to 1.40.0.
     new 1d8e36abd9 gnu: r-motifbreakr: Update to 2.12.0.
     new 1acf7fdae3 gnu: r-motifstack: Update to 1.42.0.
     new 380c5b1894 gnu: r-genomicscores: Update to 2.10.0.
     new 82015ac5b1 gnu: r-atacseqqc: Update to 1.22.0.
     new a2ec0390a7 gnu: r-gofuncr: Update to 1.18.0.
     new d48170687b gnu: r-annotationtools: Update to 1.72.0.
     new d0a0afe1da gnu: r-allelicimbalance: Update to 1.36.0.
     new 265c03a7bd gnu: r-aucell: Update to 1.20.1.
     new c410fa50e1 gnu: r-ebimage: Update to 4.40.0.
     new 66612f9583 gnu: r-yamss: Update to 1.24.0.
     new a072ce0ecc gnu: r-gtrellis: Update to 1.30.0.
     new f1a1fed1df gnu: r-somaticsignatures: Update to 2.34.0.
     new 42b297b295 gnu: r-yapsa: Update to 1.24.0.
     new 4da41a5977 gnu: r-gcrma: Update to 2.70.0.
     new 0ac185ebb4 gnu: r-quantro: Update to 1.32.0.
     new 802db22edf gnu: r-yarn: Update to 1.24.0.
     new 275fda864a gnu: r-roar: Update to 1.34.0.
     new 61edc0f206 gnu: r-massspecwavelet: Update to 1.64.0.
     new bcc13d3642 gnu: r-xcms: Update to 3.20.0.
     new 9daff45146 gnu: r-wppi: Update to 1.6.0.
     new c7c004c36e gnu: r-wrench: Update to 1.16.0.
     new 57fec18eae gnu: r-wiggleplotr: Update to 1.22.0.
     new 75ca7d19fd gnu: r-widgettools: Update to 1.76.0.
     new 36edd2b288 gnu: r-webbioc: Update to 1.70.0.
     new 70e32fd0bf gnu: r-zinbwave: Update to 1.20.0.
     new f16c7d46cc gnu: r-zfpkm: Update to 1.20.0.
     new 42e093c575 gnu: r-rbowtie2: Update to 2.4.0.
     new 471040c5d1 gnu: r-progeny: Update to 1.20.0.
     new 628ce9bf48 gnu: r-arrmnormalization: Update to 1.38.0.
     new 43b69b74d3 gnu: r-biocfilecache: Update to 2.6.0.
     new b35b27b983 gnu: r-iclusterplus: Update to 1.34.0.
     new 0f6cd30c7a gnu: r-rbowtie: Update to 1.38.0.
     new 41e534e93a gnu: r-sgseq: Update to 1.32.0.
     new a9dd4f8bd6 gnu: r-rhisat2: Update to 1.14.0.
     new 1a99e38e8d gnu: r-quasr: Update to 1.38.0.
     new afd5dfff03 gnu: r-rqc: Update to 1.32.0.
     new df921b1f69 gnu: r-birewire: Update to 3.30.0.
     new 812fd22ad3 gnu: r-multidataset: Update to 1.26.0.
     new 8772941e80 gnu: r-ropls: Update to 1.30.0.
     new 254acb7ddc gnu: r-biosigner: Update to 1.26.0.
     new 2aaa3f4414 gnu: r-annotatr: Update to 1.24.0.
     new 9c3506a26c gnu: r-rsubread: Update to 2.12.0.
     new 944e48a861 gnu: r-consensusclusterplus: Update to 1.62.0.
     new e6dc952cbb gnu: r-cytolib: Update to 2.10.0.
     new c5130dfef1 gnu: r-flowcore: Update to 2.10.0.
     new 59a3f6df90 gnu: r-flowmeans: Update to 1.58.0.
     new a87bcca9f2 gnu: r-ncdfflow: Update to 2.44.0.
     new ffe3bfa1ba gnu: r-ggcyto: Update to 1.26.0.
     new 22f8c5350e gnu: r-flowviz: Update to 1.62.0.
     new 223fb32492 gnu: r-flowclust: Update to 3.36.0.
     new d029859dd2 gnu: r-rprotobuflib: Update to 2.10.0.
     new 8a089e4e11 gnu: r-flowworkspace: Update to 4.10.0.
     new 2061e5af92 gnu: r-flowstats: Update to 4.10.0.
     new 522e1136b6 gnu: r-opencyto: Update to 2.10.0.
     new 90be8abee6 gnu: r-cytoml: Update to 2.10.0.
     new 6741cfad7c gnu: r-flowsom: Update to 2.6.0.
     new f80ad8d51b gnu: r-mixomics: Update to 6.22.0.
     new 3073f30b07 gnu: r-depecher: Update to 1.14.0.
     new 3857d2dd8d gnu: r-rcistarget: Update to 1.17.0.
     new 355400fff2 gnu: r-chicago: Update to 1.26.0.
     new 5adc9823f8 gnu: r-cicero: Update to 1.16.0.
     new a6580915af gnu: r-circrnaprofiler: Update to 1.12.0.
     new f184b3a86b gnu: r-genie3: Update to 1.20.0.
     new d29b13e9be gnu: r-roc: Update to 1.74.0.
     new 1d03230dc8 gnu: r-watermelon: Update to 2.4.0.
     new ba535c8148 gnu: r-gdsfmt: Update to 1.34.0.
     new 63b8d104dc gnu: r-bigmelon: Update to 1.24.0.
     new 1f7c82bf0b gnu: r-seqbias: Update to 1.46.0.
     new d9b593d522 gnu: r-reqon: Update to 1.44.0.
     new 827abdb960 gnu: r-wavcluster: Update to 2.32.0.
     new 8a2f4b7192 gnu: r-variantfiltering: Update to 1.34.0.
     new 30bfeccabb gnu: r-variancepartition: Update to 1.28.0.
     new 86eddd9e14 gnu: r-htqpcr: Update to 1.52.0.
     new ba16a0a2ee gnu: r-unifiedwmwqpcr: Update to 1.34.0.
     new ffea168d76 gnu: r-universalmotif: Update to 1.16.0.
     new 949b5f3ddb gnu: r-ace: Update to 1.16.0.
     new b5a0834c2f gnu: r-acgh: Update to 1.76.0.
     new 5fed6cbcbc gnu: r-acme: Update to 2.54.0.
     new fcde82ae09 gnu: r-acde: Update to 1.28.0.
     new ade1bef97a gnu: r-bgmix: Update to 1.58.0.
     new 16e636eccb gnu: r-bgx: Update to 1.64.0.
     new 02928ed15f gnu: r-bhc: Update to 1.50.0.
     new 002ef09276 gnu: r-bicare: Update to 1.56.0.
     new a1d8a95a06 gnu: r-bifet: Update to 1.18.0.
     new 4665e589d6 gnu: r-rsbml: Update to 2.56.0.
     new 7939489f80 gnu: r-hypergraph: Update to 1.70.0.
     new b90e4cdd56 gnu: r-hyperdraw: Update to 1.50.0.
     new dae60e1c1f gnu: r-biggr: Update to 1.34.0.
     new 087322f6fa gnu: r-bigpint: Update to 1.14.0.
     new 8bbcb000c7 gnu: r-chemminer: Update to 3.50.0.
     new 4cf44682fb gnu: r-fmcsr: Update to 1.40.0.
     new a6a6f4466f gnu: r-bioassayr: Update to 1.36.0.
     new 828084b2cb gnu: r-biobroom: Update to 1.30.0.
     new 2cd3b14071 gnu: r-graphite: Update to 1.44.0.
     new 0f7ac7b091 gnu: r-reactomepa: Update to 1.42.0.
     new 712bce2124 gnu: r-ebarrays: Update to 2.62.0.
     new 5f39d8aa86 gnu: r-bioccheck: Update to 1.34.0.
     new dfad35abc6 gnu: r-biocgraph: Update to 1.60.0.
     new dcb59af845 gnu: r-biocstyle: Update to 2.26.0.
     new d87f979e28 gnu: r-biocviews: Update to 1.66.0.
     new 9762908889 gnu: r-experimenthub: Update to 2.6.0.
     new 55c39e2947 gnu: r-grohmm: Update to 1.32.0.
     new 5557dea898 gnu: r-multiassayexperiment: Update to 1.24.0.
     new 1eaf500dd6 gnu: r-bioconcotk: Update to 1.18.0.
     new 1a19353ae1 gnu: r-biocor: Update to 1.22.0.
     new c1cff36f4c gnu: r-biocpkgtools: Update to 1.16.0.
     new ec4583b1d2 gnu: r-biocset: Update to 1.12.0.
     new 3e451b9415 gnu: r-biocworkflowtools: Update to 1.24.0.
     new 29c12faa87 gnu: r-biodist: Update to 1.70.0.
     new 4f3b6abb5f gnu: r-pcatools: Update to 2.10.0.
     new c705fcaaa5 gnu: r-rgreat: Update to 2.0.1.
     new 79c096cb2e gnu: r-m3c: Update to 1.20.0.
     new a02007bd88 gnu: r-icens: Update to 1.70.0.
     new 4737a25691 gnu: r-preprocesscore: Update to 1.60.0.
     new 96cd3b4bcf gnu: r-s4vectors: Update to 0.36.0.
     new f074346f2c gnu: r-rgraphviz: Update to 2.42.0.
     new 65866be416 gnu: r-fishpond: Update to 2.4.0.
     new 06c18fde52 gnu: r-fithic: Update to 1.24.0.
     new ab92277de4 gnu: r-hitc: Update to 1.42.0.
     new 9e45f2c183 gnu: r-hdf5array: Update to 1.26.0.
     new 2a5fb31db9 gnu: r-rhdf5lib: Update to 1.20.0.
     new 6dfa3f50b9 gnu: r-beachmat: Update to 2.14.0.
     new 6dc8ec0358 gnu: r-cner: Update to 1.34.0.
     new 21b32e45bd gnu: r-tfbstools: Update to 1.36.0.
     new 8b332d676d gnu: r-maftools: Update to 2.14.0.
     new 5374b55b68 gnu: r-motifmatchr: Update to 1.20.0.
     new 64ccd0ff3c gnu: r-chromvar: Update to 1.20.0.
     new d748ae3d00 gnu: r-singlecellexperiment: Update to 1.20.0.
     new 54a67ddf86 gnu: r-singler: Update to 2.0.0.
     new 3fa18b5504 gnu: r-scuttle: Update to 1.8.0.
     new 14e3905c6e gnu: r-scater: Update to 1.26.1.
     new c73d3e9bad gnu: r-scran: Update to 1.26.0.
     new 2dc26068eb gnu: r-sparsematrixstats: Update to 1.10.0.
     new 377a9b2177 gnu: r-delayedmatrixstats: Update to 1.20.0.
     new b5a0d81448 gnu: r-mscoreutils: Update to 1.10.0.
     new 0640f750b4 gnu: r-msfeatures: Update to 1.6.0.
     new 94a86e7e39 gnu: r-biocio: Update to 1.8.0.
     new 5c6c7831d6 gnu: r-msmseda: Update to 1.36.0.
     new 01e78296bc gnu: r-msmstests: Update to 1.36.0.
     new dbeb05e6a3 gnu: r-catalyst: Update to 1.22.0.
     new 77f2aa3fa4 gnu: r-erma: Update to 1.14.0.
     new 34867ac9cf gnu: r-ggbio: Update to 1.46.0.
     new 5f3ff4f884 gnu: r-gviz: Update to 1.42.0.
     new b6e56ceeb9 gnu: r-gwascat: Update to 2.30.0.
     new db290bf5b9 gnu: r-kegggraph: Update to 1.58.0.
     new 1315c532de gnu: r-ldblock: Update to 1.28.0.
     new ddc7edf0b3 gnu: r-pathview: Update to 1.38.0.
     new 1ff0bc4e7b gnu: r-snpstats: Update to 1.48.0.
     new 5950a171ba gnu: r-chromstar: Update to 1.24.0.
     new 3ca58a4ff3 gnu: r-guitar: Update to 2.14.0.
     new 3823aa40a3 gnu: r-ballgown: Update to 2.30.0.
     new 5604f64c34 gnu: r-megadepth: Update to 1.8.0.
     new 81cea8424d gnu: r-beclear: Update to 2.14.0.
     new 3912f43996 gnu: r-bgeecall: Update to 1.14.0.
     new 009ac4e3a9 gnu: r-bgeedb: Update to 2.24.0.
     new 8ba466faff gnu: r-biobtreer: Update to 1.10.0.
     new dbaad2365a gnu: r-minet: Update to 3.56.0.
     new 727cd07d1a gnu: r-genetclassifier: Update to 1.38.0.
     new 925642f837 gnu: r-dir-expiry: Update to 1.6.0.
     new f5a514b605 gnu: r-basilisk-utils: Update to 1.10.0.
     new 3aea2c40d8 gnu: r-basilisk: Update to 1.10.2.
     new 4fcf1f08ec gnu: r-biocthis: Update to 1.8.1.
     new efc663040b gnu: r-biocdockermanager: Update to 1.10.0.
     new ffd5e53e87 gnu: r-biodb: Update to 1.6.0.
     new 4875f37cb6 gnu: r-biomformat: Update to 1.26.0.
     new 3879ddbdb9 gnu: r-mvcclass: Update to 1.72.0.
     new c0412736d8 gnu: r-biomvcclass: Update to 1.66.0.
     new 858d9ccd9b gnu: r-biomvrcns: Update to 1.38.0.
     new 1118d6e856 gnu: r-bionero: Update to 1.6.0.
     new 01fb7c35e7 gnu: r-bionet: Update to 1.58.0.
     new 219b98fee9 gnu: r-bionetstat: Update to 1.18.0.
     new f230df5f4f gnu: r-bioqc: Update to 1.26.0.
     new 3ed0a63106 gnu: r-biotip: Update to 1.12.0.
     new 3b8df103f7 gnu: r-biotmle: Update to 1.22.0.
     new c2c91d9dfe gnu: r-bsseq: Update to 1.34.0.
     new 95792cda89 gnu: r-dada2: Update to 1.26.0.
     new e524c12e06 gnu: r-dmrseq: Update to 1.18.0.
     new 3f58454739 gnu: r-omicade4: Update to 1.38.0.
     new 926fe78f73 gnu: r-omnipathr: Update to 3.5.25.
     new dde0da5a95 gnu: r-biscuiteer: Update to 1.12.0.
     new 7a33311bfd gnu: r-tcgabiolinks: Update to 2.25.3.
     new 5140be4c81 gnu: r-tricycle: Update to 1.6.0.
     new 9988c60ea3 gnu: r-tximeta: Update to 1.16.0.
     new 54afdb3de1 gnu: r-phyloseq: Update to 1.42.0.
     new f3004710fa gnu: r-ggtern: Update to 3.4.0.
     new ffe149ccc5 gnu: r-with-tests: Drop labels from input lists.
     new eeeca2341d gnu: r-with-tests: Update to 4.2.2.
     new a8082fefe0 gnu: r-minimal: Use %store-directory instead of /gnu/store.
     new 4c0449ba8f gnu: r-minimal: Simplify build phase.
     new 04340b27ba gnu: r-bambu: Update to 3.0.2.
     new d3696e71a9 gnu: r-deconvr: Update to 1.4.2.
     new 3bc54ddeab gnu: r-chipseeker: Update to 1.34.1.
     new a5ee462b7a gnu: r-shortread: Update to 1.56.1.
     new f9747ecc2c gnu: r-dose: Update to 3.24.2.
     new 8bfac375aa gnu: r-bioccheck: Update to 1.34.2.
     new a2ad5b53bf gnu: r-rgreat: Update to 2.0.2.
     new f43a41d196 gnu: r-scuttle: Update to 1.8.1.

The 457 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.