Re: Using julia in guix

[zimoun]

Hi,

On Wed, 3 Nov 2021 at 00:30, Théo Maxime Tyburn <theo.tyburn@gmail.com> wrote:

> I started using julia in one of my university projects and I am not sure
> how this should be done the guix way. Has someone experience with this ?

Cool!


> For know I just used the julia package manager and the packages are in
> ~/.julia. I was not able to use the guix packages for julia
> however. Should something be done manually to tell julia where to find
> its packages ?

For now, it is either packages from Pkg.jl or either packages julia-*
from Guix.  A patch [1] is still pending for being able to mix both.
Aside that packages from Pkg.jl do not always work out-of-the-box,
sadly.

1: <http://issues.guix.gnu.org/51319>


> I encountered two problems. The first with the package "GR" the
> second with the package "GLFW". I encountered these bugs while trying
> the packages "Plots" and the "GLMakie" backend of "Makie"

IIUC, you installed all the packages using Pkg.jl, right?

Because then, I get:

--8<---------------cut here---------------start------------->8---
ERROR: could not download
https://pkg.julialang.org/registry/23338594-aafe-5451-b93e-139f81909106/302047ed63e49eace1abd20f300ac6e22768690b
--8<---------------cut here---------------end--------------->8---

and I do not know if Pkg.jl works correctly with the current julia
from Guix.  For instance, "guix shell julia -CN -- julia" then 'using
Pkg; Pkg.add("Plots")' reports failures.  One is reference to build
directory "/tmp/guix-build-julia-1.6.2.drv-0", see [2].

2: <http://issues.guix.gnu.org/issue/48238>



> The GR bug:
> > julia> using GR
> > julia> histogram(randn(10000))
> > env: 
> > ‘/home/teddd/.julia/artifacts/b5fea2b0d5c84336f26b139587a84ee7e8ca2e12/bin/gksqt’:
> >  No such file or directory
> > connect: Connection refused
> > GKS: can't connect to GKS socket application[
> it then exits because of a segmentation fault.

Well, I do not know where does the issue come from.  I suspect
something related to [2] above.

For now, I do not have a solution and I do not have time to work on
it.  Sorry.  I would be happy if someone fixes the issue; probably
patch#51319 helps here. :-)

Cheers,
simon