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22/49: gnu: r-edger: Update to 3.16.0.
From: |
Ricardo Wurmus |
Subject: |
22/49: gnu: r-edger: Update to 3.16.0. |
Date: |
Wed, 26 Oct 2016 07:29:05 +0000 (UTC) |
rekado pushed a commit to branch master
in repository guix.
commit 5e48005fa96d25214b8afb1bd61abbfa9cc243b9
Author: Ricardo Wurmus <address@hidden>
Date: Wed Oct 26 08:53:46 2016 +0200
gnu: r-edger: Update to 3.16.0.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.16.0.
[propagated-inputs]: Add r-locfit.
---
gnu/packages/bioinformatics.scm | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9bbe0d8..1181058 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6162,17 +6162,18 @@ names in their natural, rather than lexicographic,
order.")
(define-public r-edger
(package
(name "r-edger")
- (version "3.14.0")
+ (version "3.16.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "edgeR" version))
(sha256
(base32
- "14vrygy7rz5ngaap4kgkvr3j18y5l6m742n79h68plk6iqgmsskn"))))
+ "1qr20j55m35dwzqyzzmla69gk5bzff8v1v2qjh7yd3362wq1ch49"))))
(properties `((upstream-name . "edgeR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-limma" ,r-limma)))
+ `(("r-limma" ,r-limma)
+ ("r-locfit" ,r-locfit)))
(home-page "http://bioinf.wehi.edu.au/edgeR")
(synopsis "EdgeR does empirical analysis of digital gene expression data")
(description "This package can do differential expression analysis of
- 01/49: import cran: Use URL for Bioconductor 3.4., (continued)
- 01/49: import cran: Use URL for Bioconductor 3.4., Ricardo Wurmus, 2016/10/26
- 08/49: gnu: r-annotationforge: Update to 1.16.0., Ricardo Wurmus, 2016/10/26
- 17/49: gnu: r-biocinstaller: Update to 1.24.0., Ricardo Wurmus, 2016/10/26
- 13/49: gnu: r-shortread: Update to 1.32.0., Ricardo Wurmus, 2016/10/26
- 16/49: gnu: r-biocgenerics: Update to 0.20.0., Ricardo Wurmus, 2016/10/26
- 19/49: gnu: r-s4vectors: Update to 0.12.0., Ricardo Wurmus, 2016/10/26
- 12/49: gnu: r-gostats: Update to 2.40.0., Ricardo Wurmus, 2016/10/26
- 24/49: gnu: r-limma: Update to 3.30.0., Ricardo Wurmus, 2016/10/26
- 31/49: gnu: r-biostrings: Update to 2.42.0., Ricardo Wurmus, 2016/10/26
- 18/49: gnu: r-dnacopy: Update to 1.48.0., Ricardo Wurmus, 2016/10/26
- 22/49: gnu: r-edger: Update to 3.16.0.,
Ricardo Wurmus <=
- 29/49: gnu: r-biomart: Update to 2.30.0., Ricardo Wurmus, 2016/10/26
- 21/49: gnu: r-genomeinfodb: Update to 1.10.0., Ricardo Wurmus, 2016/10/26
- 07/49: gnu: r-deseq2: Update to 1.14.0., Ricardo Wurmus, 2016/10/26
- 23/49: gnu: r-variantannotation: Update to 1.20.0., Ricardo Wurmus, 2016/10/26
- 11/49: gnu: r-category: Update to 2.40.0., Ricardo Wurmus, 2016/10/26
- 14/49: gnu: r-systempiper: Update to 1.8.1., Ricardo Wurmus, 2016/10/26
- 15/49: gnu: r-grohmm: Update to 1.8.0., Ricardo Wurmus, 2016/10/26
- 30/49: gnu: r-biocparallel: Update to 1.8.0., Ricardo Wurmus, 2016/10/26
- 20/49: gnu: r-iranges: Update to 2.8.0., Ricardo Wurmus, 2016/10/26
- 26/49: gnu: r-genomicranges: Update to 1.26.1., Ricardo Wurmus, 2016/10/26