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06/112: gnu: r-chippeakanno: Update to 3.14.0.
From: |
Ricardo Wurmus |
Subject: |
06/112: gnu: r-chippeakanno: Update to 3.14.0. |
Date: |
Sat, 2 Jun 2018 07:39:57 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit f794e85daa8c401ab22b5bdacd897ccf9ea3b266
Author: Ricardo Wurmus <address@hidden>
Date: Sat Jun 2 11:41:47 2018 +0200
gnu: r-chippeakanno: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.0.
[propagated-inputs]: Add r-biostrings, r-delayedarray, r-genomicranges,
r-iranges, and r-s4vectors.
---
gnu/packages/bioconductor.scm | 9 +++++++--
1 file changed, 7 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 16b5e71..5363490 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -226,23 +226,27 @@ expressed genes in DNA microarray experiments.")
(define-public r-chippeakanno
(package
(name "r-chippeakanno")
- (version "3.12.7")
+ (version "3.14.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ChIPpeakAnno" version))
(sha256
(base32
- "1zab489d7a6bh6ylc68x6yn47gdkmr7p3677grx9l2qafrryjr04"))))
+ "1kcnc3cnmrhdk1x7q3y6zsz09pgd3xn9xy1hfbxz48cajlb18ad0"))))
(properties `((upstream-name . "ChIPpeakAnno")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
+ ("r-biostrings" ,r-biostrings)
+ ("r-delayedarray" ,r-delayedarray)
("r-go-db" ,r-go-db)
("r-biomart" ,r-biomart)
("r-bsgenome" ,r-bsgenome)
("r-genomicfeatures" ,r-genomicfeatures)
+ ("r-genomicranges" ,r-genomicranges)
("r-genomeinfodb" ,r-genomeinfodb)
+ ("r-iranges" ,r-iranges)
("r-matrixstats" ,r-matrixstats)
("r-annotationdbi" ,r-annotationdbi)
("r-limma" ,r-limma)
@@ -254,6 +258,7 @@ expressed genes in DNA microarray experiments.")
("r-dbi" ,r-dbi)
("r-ensembldb" ,r-ensembldb)
("r-biobase" ,r-biobase)
+ ("r-s4vectors" ,r-s4vectors)
("r-seqinr" ,r-seqinr)
("r-idr" ,r-idr)
("r-genomicalignments" ,r-genomicalignments)
- branch master updated (d5452aa -> 41f1755), Ricardo Wurmus, 2018/06/02
- 02/112: gnu: r-hpar: Update to 1.22.2., Ricardo Wurmus, 2018/06/02
- 01/112: gnu: r-minimal: Update to 3.5.0., Ricardo Wurmus, 2018/06/02
- 05/112: gnu: r-ripseeker: Update to 1.20.0., Ricardo Wurmus, 2018/06/02
- 04/112: gnu: r-diffbind: Update to 2.8.0., Ricardo Wurmus, 2018/06/02
- 07/112: gnu: r-marray: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 08/112: gnu: r-cghbase: Update to 1.40.0., Ricardo Wurmus, 2018/06/02
- 06/112: gnu: r-chippeakanno: Update to 3.14.0.,
Ricardo Wurmus <=
- 11/112: gnu: r-annotate: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 12/112: gnu: r-copynumber: Update to 1.20.0., Ricardo Wurmus, 2018/06/02
- 13/112: gnu: r-geneplotter: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 15/112: gnu: r-deseq2: Update to 1.20.0., Ricardo Wurmus, 2018/06/02
- 20/112: gnu: r-category: Update to 2.46.0., Ricardo Wurmus, 2018/06/02
- 10/112: gnu: r-qdnaseq: Update to 1.16.0., Ricardo Wurmus, 2018/06/02
- 16/112: gnu: r-dexseq: Update to 1.26.0., Ricardo Wurmus, 2018/06/02
- 14/112: gnu: r-genefilter: Update to 1.62.0., Ricardo Wurmus, 2018/06/02
- 18/112: gnu: r-rbgl: Update to 1.56.0., Ricardo Wurmus, 2018/06/02
- 22/112: gnu: r-shortread: Update to 1.38.0., Ricardo Wurmus, 2018/06/02