[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
branch master updated (d5452aa -> 41f1755)
From: |
Ricardo Wurmus |
Subject: |
branch master updated (d5452aa -> 41f1755) |
Date: |
Sat, 2 Jun 2018 07:39:54 -0400 (EDT) |
rekado pushed a change to branch master
in repository guix.
from d5452aa gnu: emacs-elfeed: Update to 3.0.0.
new d22546c gnu: r-minimal: Update to 3.5.0.
new 2f5b3d8 gnu: r-hpar: Update to 1.22.2.
new 72427c7 gnu: r-regioner: Update to 1.12.0.
new 45bbccf gnu: r-diffbind: Update to 2.8.0.
new 43734b4 gnu: r-ripseeker: Update to 1.20.0.
new f794e85 gnu: r-chippeakanno: Update to 3.14.0.
new 6748708 gnu: r-marray: Update to 1.58.0.
new 205df4a gnu: r-cghbase: Update to 1.40.0.
new 5c0df20 gnu: r-cghcall: Update to 2.42.0.
new 81b0181 gnu: r-qdnaseq: Update to 1.16.0.
new 02be818 gnu: r-annotate: Update to 1.58.0.
new 14e9235 gnu: r-copynumber: Update to 1.20.0.
new 4d70c8c gnu: r-geneplotter: Update to 1.58.0.
new 41657b1 gnu: r-genefilter: Update to 1.62.0.
new 51c1f96 gnu: r-deseq2: Update to 1.20.0.
new 16da69b gnu: r-dexseq: Update to 1.26.0.
new 5516db9 gnu: r-annotationforge: Update to 1.22.0.
new 9177ac2 gnu: r-rbgl: Update to 1.56.0.
new f1094f5 gnu: r-gseabase: Update to 1.42.0.
new d8410d6 gnu: r-category: Update to 2.46.0.
new 9da8e27 gnu: r-gostats: Update to 2.46.0.
new eabe78f gnu: r-shortread: Update to 1.38.0.
new 712fe39 gnu: r-systempiper: Update to 1.14.0.
new 9370b8e gnu: r-grohmm: Update to 1.14.0.
new e5907a4 gnu: r-biocgenerics: Update to 0.26.0.
new 97af51e gnu: r-biocinstaller: Update to 1.30.0.
new e5f52b6 gnu: r-biocviews: Update to 1.48.0.
new dc6c168 gnu: r-biocstyle: Update to 2.8.2.
new 3679a2f gnu: r-bioccheck: Update to 1.16.0.
new 607acf3 gnu: r-dnacopy: Update to 1.54.0.
new 33cd15f gnu: r-s4vectors: Update to 0.18.2.
new 8b44c28 gnu: r-iranges: Update to 2.14.10.
new 953c8b1 gnu: r-genomeinfodb: Update to 1.16.0.
new 4639025 gnu: r-edger: Update to 3.22.2.
new d358a5a gnu: r-variantannotation: Update to 1.26.0.
new 0a465e5 gnu: r-limma: Update to 3.36.1.
new c2401d0 gnu: r-xvector: Update to 0.20.0.
new e51afc6 gnu: r-genomicranges: Update to 1.32.3.
new 6fd71f1 gnu: r-biobase: Update to 2.40.0.
new 77f66fe gnu: r-annotationdbi: Update to 1.42.1.
new 1763cba gnu: r-biomart: Update to 2.36.1.
new e6eac58 gnu: r-biocparallel: Update to 1.14.1.
new 942655a gnu: r-biostrings: Update to 2.48.0.
new d2367a8 gnu: r-rsamtools: Update to 1.32.0.
new 82f593f gnu: r-delayedarray: Update to 0.6.0.
new 9bf4110 gnu: r-summarizedexperiment: Update to 1.10.1.
new 90102bd gnu: r-genomicalignments: Update to 1.16.0.
new a30df29 gnu: r-rtracklayer: Update to 1.40.2.
new b4ad4ec gnu: r-genomicfeatures: Update to 1.32.0.
new 2f66fec gnu: r-graph: Update to 1.58.0.
new f2eb2e4 gnu: r-topgo: Update to 2.32.0.
new 89ef133 gnu: r-bsgenome: Update to 1.48.0.
new 25d1df5 gnu: r-impute: Update to 1.54.0.
new 5229ced gnu: r-seqpattern: Update to 1.12.0.
new 17d35de gnu: r-genomation: Update to 1.12.0.
new 8217c2d gnu: r-seqlogo: Update to 1.46.0.
new 7e6537e gnu: r-motifrg: Update to 1.24.0.
new 2c480bb gnu: r-zlibbioc: Update to 1.26.0.
new 1a08bb8 gnu: r-rhtslib: Update to 1.12.1.
new 72f11ff gnu: r-bamsignals: Update to 1.12.0.
new b6c2c8f gnu: r-mutationalpatterns: Update to 1.6.1.
new c76e8ba gnu: r-tximport: Update to 1.8.0.
new d73c572 gnu: r-rhdf5: Update to 2.24.0.
new 62509bb gnu: r-annotationfilter: Update to 1.4.0.
new 8f94487 gnu: r-chipseq: Update to 1.30.0.
new aae4f71 gnu: r-copywriter: Update to 2.12.0.
new 19ad568 gnu: r-methylkit: Update to 1.6.0.
new 9547dd8 gnu: r-sva: Update to 3.28.0.
new a02b820 gnu: r-protgenerics: Update to 1.12.0.
new 39cc491 gnu: r-mzr: Update to 2.14.0.
new 82589f7 gnu: r-affyio: Update to 1.50.0.
new 5837f18 gnu: r-affy: Update to 1.58.0.
new af87106 gnu: r-vsn: Update to 3.48.1.
new 7bd2582 gnu: r-mzid: Update to 1.18.0.
new 0f773b9 gnu: r-pcamethods: Update to 1.72.0.
new 250d78e gnu: r-msnbase: Update to 2.6.1.
new bdc8b40 gnu: r-msnid: Update to 1.14.0.
new 0ebd7a4 gnu: r-aroma-light: Update to 3.10.0.
new 749b712 gnu: r-deseq: Update to 1.32.0.
new a67dd4c gnu: r-edaseq: Update to 2.14.0.
new 420415b gnu: r-interactivedisplaybase: Update to 1.18.0.
new 646439c gnu: r-annotationhub: Update to 2.12.0.
new 15cc1a6 gnu: r-fastseg: Update to 1.26.0.
new 419e438 gnu: r-keggrest: Update to 1.20.0.
new 1ba126e gnu: r-gage: Update to 2.30.0.
new d1463f1 gnu: r-genomicfiles: Update to 1.16.0.
new d3fb2ad gnu: r-complexheatmap: Update to 1.18.0.
new 19adb89 gnu: r-dirichletmultinomial: Update to 1.22.0.
new bbcd19f gnu: r-ensembldb: Update to 2.4.1.
new 94ae875 gnu: r-organismdbi: Update to 1.22.0.
new 34cc18d gnu: r-biovizbase: Update to 1.28.0.
new e214a6e gnu: r-ggbio: Update to 1.28.0.
new dcd1f02 gnu: r-gqtlbase: Update to 1.12.0.
new d26f95d gnu: r-snpstats: Update to 1.30.0.
new 9b0b108 gnu: r-erma: Update to 0.12.0.
new 45c29a6 gnu: r-ldblock: Update to 1.10.0.
new 6929b97 gnu: r-gqtlstats: Update to 1.12.0.
new fecbbac gnu: r-gviz: Update to 1.24.0.
new 2d3c172 gnu: r-gwascat: Update to 2.12.0.
new 8db6256 gnu: r-sushi: Update to 1.18.0.
new 4dedecb gnu: r-fithic: Update to 1.6.0.
new c6c619c gnu: r-hitc: Update to 1.24.0.
new 5cd725d gnu: r-qvalue: Update to 2.12.0.
new 0840352 gnu: r-hdf5array: Update to 1.8.0.
new e9c4173 gnu: r-rhdf5lib: Update to 1.2.1.
new fd61323 gnu: r-beachmat: Update to 1.2.1.
new d99e093 gnu: r-singlecellexperiment: Update to 1.2.0.
new 8ec56b2 gnu: r-delayedmatrixstats: Update to 1.2.0.
new d7e3299 gnu: r-scran: Update to 1.8.2.
new 7799a01 gnu: r-rgraphviz: Update to 2.24.0.
new 8340224 gnu: r-mvtnorm: Update to 1.0-8.
new 41f1755 import: cran: Update to Bioconductor 3.7.
The 112 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
gnu/packages/bioconductor.scm | 51 +++--
gnu/packages/bioinformatics.scm | 465 ++++++++++++++++++++--------------------
gnu/packages/graph.scm | 4 +-
gnu/packages/statistics.scm | 33 ++-
guix/import/cran.scm | 4 +-
5 files changed, 284 insertions(+), 273 deletions(-)
- branch master updated (d5452aa -> 41f1755),
Ricardo Wurmus <=
- 02/112: gnu: r-hpar: Update to 1.22.2., Ricardo Wurmus, 2018/06/02
- 01/112: gnu: r-minimal: Update to 3.5.0., Ricardo Wurmus, 2018/06/02
- 05/112: gnu: r-ripseeker: Update to 1.20.0., Ricardo Wurmus, 2018/06/02
- 04/112: gnu: r-diffbind: Update to 2.8.0., Ricardo Wurmus, 2018/06/02
- 07/112: gnu: r-marray: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 08/112: gnu: r-cghbase: Update to 1.40.0., Ricardo Wurmus, 2018/06/02
- 06/112: gnu: r-chippeakanno: Update to 3.14.0., Ricardo Wurmus, 2018/06/02
- 11/112: gnu: r-annotate: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 12/112: gnu: r-copynumber: Update to 1.20.0., Ricardo Wurmus, 2018/06/02
- 13/112: gnu: r-geneplotter: Update to 1.58.0., Ricardo Wurmus, 2018/06/02