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02/21: gnu: Add r-ebseq.
From: |
guix-commits |
Subject: |
02/21: gnu: Add r-ebseq. |
Date: |
Wed, 13 Mar 2019 08:18:11 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 3087a2f37b5588deac54351fe4f240160b5d57b7
Author: Ricardo Wurmus <address@hidden>
Date: Wed Mar 13 09:09:00 2019 +0100
gnu: Add r-ebseq.
* gnu/packages/bioconductor.scm (r-ebseq): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7127e96..899b06a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1813,3 +1813,27 @@ and summarizing a set of statistics using a weighted
distance approach.")
"This package provides negative binomial models for two-group comparisons
and regression inferences from RNA-sequencing data.")
(license license:gpl2)))
+
+(define-public r-ebseq
+ (package
+ (name "r-ebseq")
+ (version "1.22.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "EBSeq" version))
+ (sha256
+ (base32
+ "1gzbk1hbwdan0j131ah88yryfvsiq0wqjnb09qbr4qaczpgvbad0"))))
+ (properties `((upstream-name . "EBSeq")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-blockmodeling" ,r-blockmodeling)
+ ("r-gplots" ,r-gplots)
+ ("r-testthat" ,r-testthat)))
+ (home-page "https://bioconductor.org/packages/EBSeq")
+ (synopsis "Differential expression analysis of RNA-seq data")
+ (description
+ "This package provides tools for differential expression analysis at both
+gene and isoform level using RNA-seq data")
+ (license license:artistic2.0)))
- branch master updated (2b6ab17 -> 0fbaf19), guix-commits, 2019/03/13
- 06/21: gnu: Add r-shinyjs., guix-commits, 2019/03/13
- 01/21: gnu: Add r-nbpseq., guix-commits, 2019/03/13
- 02/21: gnu: Add r-ebseq.,
guix-commits <=
- 11/21: gnu: Add r-icobra., guix-commits, 2019/03/13
- 12/21: gnu: Add r-mast., guix-commits, 2019/03/13
- 05/21: gnu: Add r-shinybs., guix-commits, 2019/03/13
- 20/21: gnu: Add r-bumphunter., guix-commits, 2019/03/13
- 09/21: gnu: Add r-nor1mix., guix-commits, 2019/03/13
- 07/21: gnu: Add r-colourpicker., guix-commits, 2019/03/13
- 04/21: gnu: Add r-ihw., guix-commits, 2019/03/13
- 08/21: gnu: Add r-ggextra., guix-commits, 2019/03/13
- 10/21: gnu: Add r-beanplot., guix-commits, 2019/03/13
- 15/21: gnu: Add r-scdd., guix-commits, 2019/03/13