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14/21: gnu: Add r-noiseq.


From: guix-commits
Subject: 14/21: gnu: Add r-noiseq.
Date: Wed, 13 Mar 2019 08:18:13 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit 6213e4418557dfece72c8aa12468490e68618d3b
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Mar 13 13:04:11 2019 +0100

    gnu: Add r-noiseq.
    
    * gnu/packages/bioconductor.scm (r-noiseq): New variable.
---
 gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++
 1 file changed, 27 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index af72593..15173e1 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2020,3 +2020,30 @@ differential expression analysis, clustering, 
visualization, and other useful
 tasks on single cell expression data.  It is designed to work with RNA-Seq and
 qPCR data, but could be used with other types as well.")
     (license license:artistic2.0)))
+
+(define-public r-noiseq
+  (package
+    (name "r-noiseq")
+    (version "2.26.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "NOISeq" version))
+       (sha256
+        (base32
+         "1wyhhi9ydlbjlz427093mdp5ppby77n37w5c2iyxlpsdk2m2nqsn"))))
+    (properties `((upstream-name . "NOISeq")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biobase" ,r-biobase)
+       ("r-matrix" ,r-matrix)))
+    (home-page "https://bioconductor.org/packages/NOISeq";)
+    (synopsis "Exploratory analysis and differential expression for RNA-seq 
data")
+    (description
+     "This package provides tools to support the analysis of RNA-seq
+expression data or other similar kind of data.  It provides exploratory plots
+to evaluate saturation, count distribution, expression per chromosome, type of
+detected features, features length, etc.  It also supports the analysis of
+differential expression between two experimental conditions with no parametric
+assumptions.")
+    (license license:artistic2.0)))



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