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05/265: gnu: Add r-multidataset.
From: |
guix-commits |
Subject: |
05/265: gnu: Add r-multidataset. |
Date: |
Sun, 15 Dec 2019 09:39:52 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit b4a22ccaaadb0934e4a44aeb25609d8abdac998b
Author: Ricardo Wurmus <address@hidden>
Date: Sat Dec 14 16:37:36 2019 +0100
gnu: Add r-multidataset.
* gnu/packages/bioconductor.scm (r-multidataset): New variable.
---
gnu/packages/bioconductor.scm | 35 +++++++++++++++++++++++++++++++++++
1 file changed, 35 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index dd52f66..894a150 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5044,6 +5044,41 @@ conditions. A Bayesian network is used to model the
regulatory structure and
Markov-Chain-Monte-Carlo is applied to sample the activity states.")
(license license:gpl2+)))
+(define-public r-multidataset
+ (package
+ (name "r-multidataset")
+ (version "1.14.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "MultiDataSet" version))
+ (sha256
+ (base32
+ "0iw99ymrv3ls023mpmgyagmb5simgsgadpj0k4bnssfaqnklywlj"))))
+ (properties `((upstream-name . "MultiDataSet")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-ggplot2" ,r-ggplot2)
+ ("r-ggrepel" ,r-ggrepel)
+ ("r-iranges" ,r-iranges)
+ ("r-limma" ,r-limma)
+ ("r-qqman" ,r-qqman)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)))
+ (home-page "https://bioconductor.org/packages/MultiDataSet/")
+ (synopsis "Implementation of MultiDataSet and ResultSet")
+ (description
+ "This package provides an implementation of the BRGE's (Bioinformatic
+Research Group in Epidemiology from Center for Research in Environmental
+Epidemiology) MultiDataSet and ResultSet. MultiDataSet is designed for
+integrating multi omics data sets and ResultSet is a container for omics
+results. This package contains base classes for MEAL and rexposome
+packages.")
+ (license license:expat)))
+
(define-public r-ropls
(package
(name "r-ropls")
- branch master updated (58c3a4f -> 6e10ac0), guix-commits, 2019/12/15
- 01/265: gnu: Add r-idpmisc., guix-commits, 2019/12/15
- 03/265: gnu: Add r-qqman., guix-commits, 2019/12/15
- 04/265: gnu: Add r-biocversion., guix-commits, 2019/12/15
- 06/265: gnu: Add r-cytolib., guix-commits, 2019/12/15
- 02/265: guix: Upgrade to Bioconductor 3.10., guix-commits, 2019/12/15
- 05/265: gnu: Add r-multidataset.,
guix-commits <=
- 07/265: gnu: Add r-ncdfflow., guix-commits, 2019/12/15
- 08/265: gnu: Add r-ggcyto., guix-commits, 2019/12/15
- 09/265: gnu: Add r-ggplot-multistats., guix-commits, 2019/12/15
- 10/265: gnu: Add r-knn-covertree., guix-commits, 2019/12/15
- 13/265: gnu: Add r-flowviz., guix-commits, 2019/12/15
- 12/265: gnu: r-rgraphviz: Update to 2.30.0., guix-commits, 2019/12/15
- 18/265: gnu: Add r-opencyto., guix-commits, 2019/12/15
- 23/265: gnu: r-affycompatible: Update to 1.46.0., guix-commits, 2019/12/15
- 15/265: gnu: Add r-rprotobuflib., guix-commits, 2019/12/15
- 20/265: gnu: r-depecher: Update to 1.2.0., guix-commits, 2019/12/15