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17/265: gnu: Add r-flowstats.
From: |
guix-commits |
Subject: |
17/265: gnu: Add r-flowstats. |
Date: |
Sun, 15 Dec 2019 09:39:55 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit b700b9ec21d5fb7664860a777c51f07015af5339
Author: Ricardo Wurmus <address@hidden>
Date: Sun Dec 15 14:25:30 2019 +0100
gnu: Add r-flowstats.
* gnu/packages/bioconductor.scm (r-flowstats): New variable.
---
gnu/packages/bioconductor.scm | 36 ++++++++++++++++++++++++++++++++++++
1 file changed, 36 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index babb553..d5eca99 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5549,6 +5549,42 @@ samples, compensation, and transformation are performed
so that the output
matches the flowJo analysis.")
(license license:artistic2.0)))
+(define-public r-flowstats
+ (package
+ (name "r-flowstats")
+ (version "3.44.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "flowStats" version))
+ (sha256
+ (base32
+ "0pql0lpf90nra7w6z6nd8l9cgjlsg2pxysfravnbzfhl3pjvd96w"))))
+ (properties `((upstream-name . "flowStats")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-cluster" ,r-cluster)
+ ("r-fda" ,r-fda)
+ ("r-flowcore" ,r-flowcore)
+ ("r-flowviz" ,r-flowviz)
+ ("r-flowworkspace" ,r-flowworkspace)
+ ("r-kernsmooth" ,r-kernsmooth)
+ ("r-ks" ,r-ks)
+ ("r-lattice" ,r-lattice)
+ ("r-mass" ,r-mass)
+ ("r-ncdfflow" ,r-ncdfflow)
+ ("r-rcolorbrewer" ,r-rcolorbrewer)
+ ("r-rrcov" ,r-rrcov)))
+ (home-page "http://www.github.com/RGLab/flowStats")
+ (synopsis "Statistical methods for the analysis of flow cytometry data")
+ (description
+ "This package provides methods and functionality to analyze flow data
+that is beyond the basic infrastructure provided by the @code{flowCore}
+package.")
+ (license license:artistic2.0)))
+
(define-public r-flowsom
(package
(name "r-flowsom")
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- 123/265: gnu: r-tximport: Update to 1.14.0., guix-commits, 2019/12/15
- 130/265: gnu: r-seqlogo: Update to 1.52.0., guix-commits, 2019/12/15
- 138/265: gnu: r-genomicalignments: Update to 1.22.1., guix-commits, 2019/12/15
- 109/265: gnu: r-complexheatmap: Update to 2.2.0., guix-commits, 2019/12/15
- 124/265: gnu: r-mutationalpatterns: Update to 1.12.0., guix-commits, 2019/12/15
- 136/265: gnu: r-genomicfeatures: Update to 1.38.0., guix-commits, 2019/12/15
- 142/265: gnu: r-biostrings: Update to 2.54.0., guix-commits, 2019/12/15
- 156/265: gnu: r-biocstyle: Update to 2.14.2., guix-commits, 2019/12/15
- 162/265: gnu: r-category: Update to 2.52.1., guix-commits, 2019/12/15
- 17/265: gnu: Add r-flowstats.,
guix-commits <=
- 11/265: gnu: r-preprocesscore: Update to 1.48.0., guix-commits, 2019/12/15
- 14/265: gnu: Add r-flowclust., guix-commits, 2019/12/15
- 21/265: gnu: r-biocgenerics: Update to 0.32.0., guix-commits, 2019/12/15
- 26/265: gnu: r-affxparser: Update to 1.58.0., guix-commits, 2019/12/15
- 30/265: gnu: r-reportingtools: Update to 2.26.0., guix-commits, 2019/12/15
- 28/265: gnu: r-hpar: Update to 1.28.0., guix-commits, 2019/12/15
- 32/265: gnu: r-oligoclasses: Update to 1.48.0., guix-commits, 2019/12/15
- 37/265: gnu: r-multtest: Update to 2.42.0., guix-commits, 2019/12/15
- 36/265: gnu: r-ripseeker: Update to 1.26.0., guix-commits, 2019/12/15
- 40/265: gnu: r-marray: Update to 1.64.0., guix-commits, 2019/12/15