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39/296: gnu: r-summarizedexperiment: Update to 1.18.1.
From: |
guix-commits |
Subject: |
39/296: gnu: r-summarizedexperiment: Update to 1.18.1. |
Date: |
Fri, 12 Jun 2020 19:29:32 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 87c98cf701cc6fc01c298d9e81dd91b9d04a2316
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Jun 12 16:13:39 2020 +0200
gnu: r-summarizedexperiment: Update to 1.18.1.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to
1.18.1.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioinformatics.scm | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5a1b894..fd00eeb 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8119,13 +8119,13 @@ array-like objects like @code{DataFrame} objects
(typically with Rle columns),
(define-public r-summarizedexperiment
(package
(name "r-summarizedexperiment")
- (version "1.16.1")
+ (version "1.18.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "SummarizedExperiment" version))
(sha256
(base32
- "1z9bdk49dajafkfvv99nv6zyn6v70iyyy2jgdp5w5z8174a2bnn1"))))
+ "07rc79k5dp0dnf4dvsxif995aa9cgfkf13yf84qnwl64k9pf3c2c"))))
(properties
`((upstream-name . "SummarizedExperiment")))
(build-system r-build-system)
@@ -8138,6 +8138,8 @@ array-like objects like @code{DataFrame} objects
(typically with Rle columns),
("r-iranges" ,r-iranges)
("r-matrix" ,r-matrix)
("r-s4vectors" ,r-s4vectors)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/SummarizedExperiment")
(synopsis "Container for representing genomic ranges by sample")
(description
- 48/296: gnu: r-seqlogo: Update to 1.54.3., (continued)
- 48/296: gnu: r-seqlogo: Update to 1.54.3., guix-commits, 2020/06/12
- 31/296: gnu: r-genomicranges: Update to 1.40.0., guix-commits, 2020/06/12
- 32/296: gnu: r-biobase: Update to 2.48.0., guix-commits, 2020/06/12
- 33/296: gnu: r-annotationdbi: Update to 1.50.0., guix-commits, 2020/06/12
- 34/296: gnu: r-biomart: Update to 2.44.0., guix-commits, 2020/06/12
- 51/296: gnu: r-rhtslib: Update to 1.20.0., guix-commits, 2020/06/12
- 49/296: gnu: r-motifrg: Update to 1.31.0., guix-commits, 2020/06/12
- 25/296: gnu: r-iranges: Update to 2.22.2., guix-commits, 2020/06/12
- 35/296: gnu: r-biocparallel: Update to 1.22.0., guix-commits, 2020/06/12
- 38/296: gnu: r-delayedarray: Update to 0.14.0., guix-commits, 2020/06/12
- 39/296: gnu: r-summarizedexperiment: Update to 1.18.1.,
guix-commits <=
- 56/296: gnu: r-rhdf5: Update to 2.32.0., guix-commits, 2020/06/12
- 59/296: gnu: r-copywriter: Update to 2.20.0., guix-commits, 2020/06/12
- 45/296: gnu: r-impute: Update to 1.62.0., guix-commits, 2020/06/12
- 53/296: gnu: r-rcas: Update to 1.14.0., guix-commits, 2020/06/12
- 54/296: gnu: r-mutationalpatterns: Update to 2.0.0., guix-commits, 2020/06/12
- 58/296: gnu: r-chipseq: Update to 1.38.0., guix-commits, 2020/06/12
- 63/296: gnu: r-affyio: Update to 1.58.0., guix-commits, 2020/06/12
- 66/296: gnu: r-mzid: Update to 1.26.0., guix-commits, 2020/06/12
- 60/296: gnu: r-methylkit: Update to 1.14.2., guix-commits, 2020/06/12
- 65/296: gnu: r-vsn: Update to 3.56.0., guix-commits, 2020/06/12