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81/296: gnu: r-ensembldb: Update to 2.12.1.
From: |
guix-commits |
Subject: |
81/296: gnu: r-ensembldb: Update to 2.12.1. |
Date: |
Fri, 12 Jun 2020 19:29:47 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 39da6fbc4078dba97fa170e5d1543cca6e0e4006
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Jun 12 16:29:50 2020 +0200
gnu: r-ensembldb: Update to 2.12.1.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.12.1.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioinformatics.scm | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 0c4602f..76f2b5c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10269,14 +10269,14 @@ originally made available by Holmes, Harris, and
Quince, 2012, PLoS ONE 7(2):
(define-public r-ensembldb
(package
(name "r-ensembldb")
- (version "2.10.2")
+ (version "2.12.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ensembldb" version))
(sha256
(base32
- "02lnpyp85zchmz404hr5381zmihvq4x9zgxdrbn2afi352vg0vab"))))
+ "1vvchc04nshxc768fp31rxb603aj3hmq8xlh5qabcwf2c3z9719g"))))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
@@ -10295,6 +10295,8 @@ originally made available by Holmes, Harris, and
Quince, 2012, PLoS ONE 7(2):
("r-rsqlite" ,r-rsqlite)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/jotsetung/ensembldb")
(synopsis "Utilities to create and use Ensembl-based annotation databases")
(description
- 80/296: gnu: r-dirichletmultinomial: Update to 1.30.0., (continued)
- 80/296: gnu: r-dirichletmultinomial: Update to 1.30.0., guix-commits, 2020/06/12
- 84/296: gnu: r-ggbio: Update to 1.36.0., guix-commits, 2020/06/12
- 62/296: gnu: r-protgenerics: Update to 1.20.0., guix-commits, 2020/06/12
- 71/296: gnu: r-deseq: Update to 1.39.0., guix-commits, 2020/06/12
- 67/296: gnu: r-pcamethods: Update to 1.80.0., guix-commits, 2020/06/12
- 72/296: gnu: r-edaseq: Update to 2.22.0., guix-commits, 2020/06/12
- 73/296: gnu: r-interactivedisplaybase: Update to 1.26.3., guix-commits, 2020/06/12
- 76/296: gnu: r-keggrest: Update to 1.28.0., guix-commits, 2020/06/12
- 77/296: gnu: r-gage: Update to 2.37.0., guix-commits, 2020/06/12
- 78/296: gnu: r-genomicfiles: Update to 1.24.0., guix-commits, 2020/06/12
- 81/296: gnu: r-ensembldb: Update to 2.12.1.,
guix-commits <=
- 83/296: gnu: r-biovizbase: Update to 1.36.0., guix-commits, 2020/06/12
- 85/296: gnu: r-gqtlbase: Update to 1.20.0., guix-commits, 2020/06/12
- 88/296: gnu: r-ldblock: Update to 1.18.0., guix-commits, 2020/06/12
- 86/296: gnu: r-snpstats: Update to 1.38.0., guix-commits, 2020/06/12
- 101/296: gnu: r-delayedmatrixstats: Update to 1.10.0., guix-commits, 2020/06/12
- 103/296: gnu: r-coverageview: Update to 1.26.0., guix-commits, 2020/06/12
- 89/296: gnu: r-gqtlstats: Update to 1.20.0., guix-commits, 2020/06/12
- 92/296: gnu: r-sushi: Update to 1.26.0., guix-commits, 2020/06/12
- 99/296: gnu: r-scater: Update to 1.16.1., guix-commits, 2020/06/12
- 102/296: gnu: r-ideoviz: Update to 1.24.0., guix-commits, 2020/06/12