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99/296: gnu: r-scater: Update to 1.16.1.
From: |
guix-commits |
Subject: |
99/296: gnu: r-scater: Update to 1.16.1. |
Date: |
Fri, 12 Jun 2020 19:29:53 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 7039b539458b37d2b66c0d06c9ae3d71ef214eee
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Jun 12 16:37:19 2020 +0200
gnu: r-scater: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.16.1.
[propagated-inputs]: Add r-rlang.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioinformatics.scm | 7 +++++--
1 file changed, 5 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 935846b..d92b87c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -11011,13 +11011,13 @@ libraries.")
(define-public r-scater
(package
(name "r-scater")
- (version "1.14.6")
+ (version "1.16.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "scater" version))
(sha256
(base32
- "0sxd1s8wdlj9926bagq4crjrk1nnmh3j3bhgrw160zfgc3y8pzck"))))
+ "0pi4mpc3lvskj5biyhc9cskcnz9q2wjmfrz7xdnx8qqd8vpy84g3"))))
(build-system r-build-system)
(propagated-inputs
`(("r-beachmat" ,r-beachmat)
@@ -11031,10 +11031,13 @@ libraries.")
("r-ggplot2" ,r-ggplot2)
("r-matrix" ,r-matrix)
("r-rcpp" ,r-rcpp)
+ ("r-rlang" ,r-rlang)
("r-s4vectors" ,r-s4vectors)
("r-singlecellexperiment" ,r-singlecellexperiment)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-viridis" ,r-viridis)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/davismcc/scater")
(synopsis "Single-cell analysis toolkit for gene expression data in R")
(description "This package provides a collection of tools for doing
- 78/296: gnu: r-genomicfiles: Update to 1.24.0., (continued)
- 78/296: gnu: r-genomicfiles: Update to 1.24.0., guix-commits, 2020/06/12
- 81/296: gnu: r-ensembldb: Update to 2.12.1., guix-commits, 2020/06/12
- 83/296: gnu: r-biovizbase: Update to 1.36.0., guix-commits, 2020/06/12
- 85/296: gnu: r-gqtlbase: Update to 1.20.0., guix-commits, 2020/06/12
- 88/296: gnu: r-ldblock: Update to 1.18.0., guix-commits, 2020/06/12
- 86/296: gnu: r-snpstats: Update to 1.38.0., guix-commits, 2020/06/12
- 101/296: gnu: r-delayedmatrixstats: Update to 1.10.0., guix-commits, 2020/06/12
- 103/296: gnu: r-coverageview: Update to 1.26.0., guix-commits, 2020/06/12
- 89/296: gnu: r-gqtlstats: Update to 1.20.0., guix-commits, 2020/06/12
- 92/296: gnu: r-sushi: Update to 1.26.0., guix-commits, 2020/06/12
- 99/296: gnu: r-scater: Update to 1.16.1.,
guix-commits <=
- 102/296: gnu: r-ideoviz: Update to 1.24.0., guix-commits, 2020/06/12
- 105/296: gnu: r-biocversion: Update to 3.11.1., guix-commits, 2020/06/12
- 107/296: gnu: r-affycomp: Update to 1.64.0., guix-commits, 2020/06/12
- 82/296: gnu: r-organismdbi: Update to 1.30.0., guix-commits, 2020/06/12
- 87/296: gnu: r-erma: Update to 1.4.0., guix-commits, 2020/06/12
- 93/296: gnu: r-fithic: Update to 1.14.0., guix-commits, 2020/06/12
- 95/296: gnu: r-hdf5array: Update to 1.16.0., guix-commits, 2020/06/12
- 98/296: gnu: r-singlecellexperiment: Update to 1.10.1., guix-commits, 2020/06/12
- 100/296: gnu: r-scran: Update to 1.16.0., guix-commits, 2020/06/12
- 90/296: gnu: r-gviz: Update to 1.32.0., guix-commits, 2020/06/12