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91/296: gnu: r-gwascat: Update to 2.20.1.
From: |
guix-commits |
Subject: |
91/296: gnu: r-gwascat: Update to 2.20.1. |
Date: |
Fri, 12 Jun 2020 19:29:50 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit ddef43a29d95895aabaf15c1140e34af8058f4b0
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Jun 12 16:33:43 2020 +0200
gnu: r-gwascat: Update to 2.20.1.
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.20.1.
[propagated-inputs]: Remove r-homo-sapiens; add r-ggplot2.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioinformatics.scm | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 71e670a..9a99ac1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10728,14 +10728,14 @@ with your data.")
(define-public r-gwascat
(package
(name "r-gwascat")
- (version "2.18.0")
+ (version "2.20.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "gwascat" version))
(sha256
(base32
- "038vhfsk2vs7inn5di093cmjbb81k7j0af385sg7l01jj70bdqq1"))))
+ "1cq5cmdrf0a0arr841yvkh6d8drc15p7mif1afr215l1s3y2dwd4"))))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
@@ -10744,11 +10744,13 @@ with your data.")
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges)
- ("r-homo-sapiens" ,r-homo-sapiens)
+ ("r-ggplot2" ,r-ggplot2)
("r-iranges" ,r-iranges)
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/gwascat")
(synopsis "Tools for data in the EMBL-EBI GWAS catalog")
(description
- 102/296: gnu: r-ideoviz: Update to 1.24.0., (continued)
- 102/296: gnu: r-ideoviz: Update to 1.24.0., guix-commits, 2020/06/12
- 105/296: gnu: r-biocversion: Update to 3.11.1., guix-commits, 2020/06/12
- 107/296: gnu: r-affycomp: Update to 1.64.0., guix-commits, 2020/06/12
- 82/296: gnu: r-organismdbi: Update to 1.30.0., guix-commits, 2020/06/12
- 87/296: gnu: r-erma: Update to 1.4.0., guix-commits, 2020/06/12
- 93/296: gnu: r-fithic: Update to 1.14.0., guix-commits, 2020/06/12
- 95/296: gnu: r-hdf5array: Update to 1.16.0., guix-commits, 2020/06/12
- 98/296: gnu: r-singlecellexperiment: Update to 1.10.1., guix-commits, 2020/06/12
- 100/296: gnu: r-scran: Update to 1.16.0., guix-commits, 2020/06/12
- 90/296: gnu: r-gviz: Update to 1.32.0., guix-commits, 2020/06/12
- 91/296: gnu: r-gwascat: Update to 2.20.1.,
guix-commits <=
- 94/296: gnu: r-hitc: Update to 1.32.0., guix-commits, 2020/06/12
- 96/296: gnu: r-rhdf5lib: Update to 1.10.0., guix-commits, 2020/06/12
- 97/296: gnu: r-beachmat: Update to 2.4.0., guix-commits, 2020/06/12
- 104/296: gnu: r-cummerbund: Update to 2.30.0., guix-commits, 2020/06/12
- 108/296: gnu: r-affycompatible: Update to 1.48.0., guix-commits, 2020/06/12
- 112/296: gnu: r-annotate: Update to 1.66.0., guix-commits, 2020/06/12
- 122/296: gnu: r-graph: Update to 1.66.0., guix-commits, 2020/06/12
- 110/296: gnu: r-affycoretools: Update to 1.60.1., guix-commits, 2020/06/12
- 114/296: gnu: r-regioner: Update to 1.20.0., guix-commits, 2020/06/12
- 116/296: gnu: r-geneplotter: Update to 1.66.0., guix-commits, 2020/06/12