[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
06/10: gnu: r-gseabase: Move to (gnu packages bioconductor).
From: |
guix-commits |
Subject: |
06/10: gnu: r-gseabase: Move to (gnu packages bioconductor). |
Date: |
Fri, 12 Mar 2021 08:53:10 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 031fdda47af642d4316e128f9ca0c3fe2cf8b4bb
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Mon Mar 8 18:57:59 2021 +0100
gnu: r-gseabase: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gseabase): Move from here...
* gnu/packages/bioconductor.scm (r-gseabase): ...to here.
---
gnu/packages/bioconductor.scm | 29 +++++++++++++++++++++++++++++
gnu/packages/bioinformatics.scm | 29 -----------------------------
2 files changed, 29 insertions(+), 29 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1c298d6..a89797a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1630,6 +1630,35 @@ exploration of the results.")
high-throughput sequencing experiments.")
(license license:artistic2.0)))
+(define-public r-gseabase
+ (package
+ (name "r-gseabase")
+ (version "1.52.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "GSEABase" version))
+ (sha256
+ (base32
+ "0dawh1kjmf6921jm77j2s2phrq5237pjc4sdh8fkln89gf48zx6i"))))
+ (properties `((upstream-name . "GSEABase")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotate" ,r-annotate)
+ ("r-annotationdbi" ,r-annotationdbi)
+ ("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-graph" ,r-graph)
+ ("r-xml" ,r-xml)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://bioconductor.org/packages/GSEABase")
+ (synopsis "Gene set enrichment data structures and methods")
+ (description
+ "This package provides classes and methods to support @dfn{Gene Set
+Enrichment Analysis} (GSEA).")
+ (license license:artistic2.0)))
+
(define-public r-hpar
(package
(name "r-hpar")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 788f780..4daaacd 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7387,35 +7387,6 @@ includes software to
")
(license license:cc0))))
-(define-public r-gseabase
- (package
- (name "r-gseabase")
- (version "1.52.1")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "GSEABase" version))
- (sha256
- (base32
- "0dawh1kjmf6921jm77j2s2phrq5237pjc4sdh8fkln89gf48zx6i"))))
- (properties `((upstream-name . "GSEABase")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-annotate" ,r-annotate)
- ("r-annotationdbi" ,r-annotationdbi)
- ("r-biobase" ,r-biobase)
- ("r-biocgenerics" ,r-biocgenerics)
- ("r-graph" ,r-graph)
- ("r-xml" ,r-xml)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (home-page "https://bioconductor.org/packages/GSEABase")
- (synopsis "Gene set enrichment data structures and methods")
- (description
- "This package provides classes and methods to support @dfn{Gene Set
-Enrichment Analysis} (GSEA).")
- (license license:artistic2.0)))
-
(define-public r-category
(package
(name "r-category")
- branch master updated (323aec6 -> df6b3c2), guix-commits, 2021/03/12
- 01/10: gnu: r-genefilter: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 02/10: gnu: r-deseq2: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 03/10: gnu: r-dexseq: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 04/10: gnu: r-annotationforge: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 05/10: gnu: r-rbgl: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 07/10: gnu: r-category: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 06/10: gnu: r-gseabase: Move to (gnu packages bioconductor).,
guix-commits <=
- 08/10: gnu: r-gostats: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 09/10: gnu: r-shortread: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 10/10: gnu: r-systempiper: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12