[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
09/54: gnu: r-impute: Move to (gnu packages bioconductor).
From: |
guix-commits |
Subject: |
09/54: gnu: r-impute: Move to (gnu packages bioconductor). |
Date: |
Mon, 31 May 2021 10:03:04 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit b832fddbfc83dfc1b13a4f113a9d3f86754e4c57
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri May 21 22:25:41 2021 +0200
gnu: r-impute: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-impute): Move from here...
* gnu/packages/bioconductor.scm (r-impute): ...to here.
---
gnu/packages/bioconductor.scm | 20 ++++++++++++++++++++
gnu/packages/bioinformatics.scm | 20 --------------------
2 files changed, 20 insertions(+), 20 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 9c6ba94..a4a3fbd 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2499,6 +2499,26 @@ Enrichment Analysis} (GSEA).")
the Human Protein Atlas project.")
(license license:artistic2.0)))
+(define-public r-impute
+ (package
+ (name "r-impute")
+ (version "1.64.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "impute" version))
+ (sha256
+ (base32
+ "1pnjasw9i19nmxwjzrd9jbln31yc5jilfvwk414ya5zbqfsazvxa"))))
+ (native-inputs
+ `(("gfortran" ,gfortran)))
+ (build-system r-build-system)
+ (home-page "https://bioconductor.org/packages/impute")
+ (synopsis "Imputation for microarray data")
+ (description
+ "This package provides a function to impute missing gene expression
+microarray data, using nearest neighbor averaging.")
+ (license license:gpl2+)))
+
(define-public r-limma
(package
(name "r-limma")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index e402efa..566370c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7976,26 +7976,6 @@ including VCF header and contents in RDF and JSON.")
information about the latest version of the Gene Ontologies.")
(license license:artistic2.0)))
-(define-public r-impute
- (package
- (name "r-impute")
- (version "1.64.0")
- (source (origin
- (method url-fetch)
- (uri (bioconductor-uri "impute" version))
- (sha256
- (base32
- "1pnjasw9i19nmxwjzrd9jbln31yc5jilfvwk414ya5zbqfsazvxa"))))
- (native-inputs
- `(("gfortran" ,gfortran)))
- (build-system r-build-system)
- (home-page "https://bioconductor.org/packages/impute")
- (synopsis "Imputation for microarray data")
- (description
- "This package provides a function to impute missing gene expression
-microarray data, using nearest neighbor averaging.")
- (license license:gpl2+)))
-
(define-public r-seqpattern
(package
(name "r-seqpattern")
- branch master updated (d2d1f8b -> ec543ba), guix-commits, 2021/05/31
- 02/54: gnu: r-rtracklayer: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 08/54: gnu: r-samr: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 04/54: gnu: r-topgo: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 09/54: gnu: r-impute: Move to (gnu packages bioconductor).,
guix-commits <=
- 13/54: gnu: r-genomationdata: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 11/54: gnu: r-go-db: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 14/54: gnu: r-pcamethods: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 16/54: gnu: r-aroma-light: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 19/54: gnu: r-interactivedisplaybase: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 06/54: gnu: r-msnid: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 07/54: gnu: r-msnbase: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 05/54: gnu: r-bsgenome: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 03/54: gnu: r-genomicfeatures: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 01/54: gnu: r-genomicalignments: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31