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49/324: gnu: r-biomart: Update to 2.48.0.
From: |
guix-commits |
Subject: |
49/324: gnu: r-biomart: Update to 2.48.0. |
Date: |
Sat, 5 Jun 2021 03:14:38 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit f9ae0a4102fd225a0a78287c0ab4446dcff85bbd
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 5 08:49:41 2021 +0200
gnu: r-biomart: Update to 2.48.0.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.0.
[propagated-inputs]: Remove r-openssl and r-xml2; add r-digest.
---
gnu/packages/bioconductor.scm | 9 ++++-----
1 file changed, 4 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 89a6930..59d4f09 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2154,26 +2154,25 @@ on Bioconductor or which replace R functions.")
(define-public r-biomart
(package
(name "r-biomart")
- (version "2.46.3")
+ (version "2.48.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "biomaRt" version))
(sha256
(base32
- "0gwmd0ykpv0gyh34c56g5m12lil20fvig49f3ih1jxrxf3q4wmq7"))))
+ "1h8lzd63qvy1y75nlnhazpkyhl6g1hz80baqg20gpxbv38wkyf55"))))
(properties
`((upstream-name . "biomaRt")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-biocfilecache" ,r-biocfilecache)
+ ("r-digest" ,r-digest)
("r-httr" ,r-httr)
- ("r-openssl" ,r-openssl)
("r-progress" ,r-progress)
("r-rappdirs" ,r-rappdirs)
("r-stringr" ,r-stringr)
- ("r-xml" ,r-xml)
- ("r-xml2" ,r-xml2)))
+ ("r-xml" ,r-xml)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/biomaRt")
- 30/324: gnu: r-delayedarray: Update to 0.18.0., (continued)
- 30/324: gnu: r-delayedarray: Update to 0.18.0., guix-commits, 2021/06/05
- 32/324: gnu: r-ideoviz: Update to 1.28.0., guix-commits, 2021/06/05
- 53/324: gnu: r-bsgenome: Update to 1.60.0., guix-commits, 2021/06/05
- 58/324: gnu: r-copywriter: Update to 2.24.0., guix-commits, 2021/06/05
- 60/324: gnu: r-dexseq: Update to 1.38.0., guix-commits, 2021/06/05
- 63/324: gnu: r-edger: Update to 3.34.0., guix-commits, 2021/06/05
- 70/324: gnu: r-genomeinfodb: Update to 1.28.0., guix-commits, 2021/06/05
- 71/324: gnu: r-genomicalignments: Update to 1.28.0., guix-commits, 2021/06/05
- 29/324: gnu: r-deepsnv: Update to 1.38.0., guix-commits, 2021/06/05
- 54/324: gnu: r-category: Update to 2.58.0., guix-commits, 2021/06/05
- 49/324: gnu: r-biomart: Update to 2.48.0.,
guix-commits <=
- 56/324: gnu: r-chipseq: Update to 1.42.0., guix-commits, 2021/06/05
- 66/324: gnu: r-gage: Update to 2.42.0., guix-commits, 2021/06/05
- 57/324: gnu: r-complexheatmap: Update to 2.8.0., guix-commits, 2021/06/05
- 73/324: gnu: r-genomicfiles: Update to 1.28.0., guix-commits, 2021/06/05
- 79/324: gnu: r-impute: Update to 1.66.0., guix-commits, 2021/06/05
- 86/324: gnu: r-mzid: Update to 1.30.0., guix-commits, 2021/06/05
- 88/324: gnu: r-pcamethods: Update to 1.84.0., guix-commits, 2021/06/05
- 92/324: gnu: r-regioner: Update to 1.24.0., guix-commits, 2021/06/05
- 74/324: gnu: r-genomicranges: Update to 1.44.0., guix-commits, 2021/06/05
- 76/324: gnu: r-gseabase: Update to 1.54.0., guix-commits, 2021/06/05