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branch master updated: gnu: Add r-acde.
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guix-commits |
Subject: |
branch master updated: gnu: Add r-acde. |
Date: |
Thu, 14 Apr 2022 07:19:33 -0400 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 1b2b1c30e2 gnu: Add r-acde.
1b2b1c30e2 is described below
commit 1b2b1c30e2adec2afa868badbada45d7d7cd755d
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Wed Apr 13 00:30:47 2022 +0200
gnu: Add r-acde.
* gnu/packages/bioconductor.scm (r-acde): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 786e79b931..6559e69711 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11729,6 +11729,31 @@ array noise or normalization methods. It is also very
fast and can be applied
on whole-genome tiling array experiments quite easily with enough memory.")
(license license:gpl2+)))
+(define-public r-acde
+ (package
+ (name "r-acde")
+ (version "1.24.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "acde" version))
+ (sha256
+ (base32
+ "13ks87am73m3bjn9ljapxml2a9cxdpgv9flwvly8aqmi3ndxyqi6"))))
+ (properties `((upstream-name . "acde")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-boot))
+ (home-page "https://bioconductor.org/packages/acde")
+ (synopsis
+ "Identification of differentially expressed genes with artificial
components")
+ (description
+ "This package provides a multivariate inferential analysis method for
+detecting differentially expressed genes in gene expression data. It uses
+artificial components, close to the data's principal components but with an
+exact interpretation in terms of differential genetic expression, to identify
+differentially expressed genes while controlling the @dfn{false discovery
+rate} (FDR).")
+ (license license:gpl3)))
+
;; This is a CRAN package, but it depends on Bioconductor packages, so we put
;; it here.
(define-public r-activedriverwgs
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