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[bug#60885] [PATCH 0/4] Some bioinfo packages
From: |
Simon Tournier |
Subject: |
[bug#60885] [PATCH 0/4] Some bioinfo packages |
Date: |
Tue, 17 Jan 2023 18:26:50 +0100 |
Hi,
Here some pacakages used in Bioinformatics.
Note that the package numbat comes with 'bin/pileup_and_phase.R' for preparing
the data, as explained in online documentation [1].
Here, this script goes under 'site-library/numbat/bin' which does not
perfectly match the online documentation mentioning 'numbat/inst/bin/'
instead.
1: https://kharchenkolab.github.io/numbat/articles/numbat.html
Cheers,
simon
Simon Tournier (4):
gnu: Add python-vireosnp.
gnu: Add r-scistreer.
gnu: Add r-roptim.
gnu: Add r-numbat.
gnu/packages/bioconductor.scm | 106 +++++++++++++++++++++++++++++++-
gnu/packages/bioinformatics.scm | 22 +++++++
gnu/packages/cran.scm | 23 ++++++-
3 files changed, 149 insertions(+), 2 deletions(-)
base-commit: ecda67a577570f412b103e5dd8ed1a44193a9c11
--
2.38.1
- [bug#60885] [PATCH 0/4] Some bioinfo packages,
Simon Tournier <=