Re: something changed ...

[Ben Abbott]

On Jul 26, 2012, at 12:25 PM, John W. Eaton wrote:

> On 26-Jul-2012, Ben Abbott wrote:
> 
> | On Jul 26, 2012, at 11:28 AM, John W. Eaton wrote:
> | 
> | > On 26-Jul-2012, Ben Abbott wrote:
> | > 
> | > | On Jul 26, 2012, at 10:18 AM, John W. Eaton wrote:
> | > | 
> | > | > On 24-Jul-2012, Ben Abbott wrote:
> | > | > 
> | > | > | My build is now ending at linking liboctave with ...
> | > | > | 
> | > | > | ld: warning: directory not found for option 
> '-L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_gcc45/gcc45/work/build/x86_64-apple-darwin11/libstdc++-v3/src'
> | > | > | ld: warning: directory not found for option 
> '-L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_gcc45/gcc45/work/build/x86_64-apple-darwin11/libstdc++-v3/src/.libs'
> | > | > | ld: warning: directory not found for option 
> '-L/opt/local/lib/gcc45/gcc/x86_64-apple-darwin11/4.5.3'
> | > | > | ld: warning: directory not found for option 
> '-L/opt/local/lib/gcc45/gcc/x86_64-apple-darwin11/4.5.3/../../..'
> | > | > | ld: library not found for -lf77blas
> | > | > | 
> | > | > | I've been trying to determine what changed, but am unable to do so. 
>  My gcc has recently been upgraded to 4.5.4, but I can't determine where the 
> reference to the older 4.5.3 is coming from.  The entire link command is 
> below with the references to 4.5.3 near the end.
> | > | > | 
> | > | > | Anyone have any ideas?
> | > | > 
> | > | > To start, what Makefile variables contain these -L options?
> | > | > 
> | > | > jwe
> | > | 
> | > | I don't see any of them in the Makefile.  From liboctave, the following 
> come up empty.
> | > | 
> | > |         fgrep -n "4.5.3" Makefile
> | > |         fgrep -n "framework veclib" Makefile
> | > |         fgrep -n "f77blas" Makefile
> | > 
> | > Do any of these strings appear in any files in your build tree?  If
> | > not, then I have no clue where those options are coming from.
> | > 
> | > jwe
> | 
> | 
> | Opps. I mis-spelled vecLib
> | 
> |     fgrep -n "framework vecLib" Makefile
> |     604:BLAS_LIBS = -framework vecLib
> | 
> | Since I'm trying to link to vecLib, that makes sense.
> | 
> | Perhap the atlas stuff is showing up because libtool detected that one or 
> more of the dependencies are linked to it? Might the 
> "-L/opt/local/lib/gcc45/gcc/x86_64-apple-darwin11/4.5.3'" part also be due to 
> a dependency being built using gcc-4.5.3 and libtool detecting that?  That 
> part only produces a warning, so that's not critical at the moment (it will 
> be when I try to wrap everything into an Application bundle).
> | 
> | In any event, the error is generated because I don't have a libf77blas. The 
> only mention of it I can find is in m4/ax_blas.m4.  Maybe there is a 
> feature/bug in what gnulib is doing?  Or maybe I'm really missing it (my 
> atlas maybe broken?).
> 
> In your original message, you showed some output that began with
> "libtool link: ...".  Prior to that, there should have been a message
> printed that begins with something like "/bin/sh ../libtool --tag=CXX
> --mode=link ...".  That is the actual libtool command.  What you
> showed is the link command that libtool actually executes.  Does the
> -lf77blas option appear in the original libtool command that appears
> in the Makefile?  If not, then I suppose it could be added by the
> libtool script.  But that's not what I would expect since the BLAS
> libraries should be part of the libtool command.  Libtool may add some
> special options for linking shared libraries, but I'm unaware of any
> special treatment of BLAS libraries.
> 
> Can you capture the entire output so that I can see the complete
> libtool command and the command line that it generates and executes?
> 
> Can you also send me the libtool script that is generated for your
> system?  It should be in the top-level directory of your Octave build
> tree.
> 
> jwe

Ok, the actual libtool command looks more reasonable. I don't see any of the 
unexpected pieces seen in the libtool link (none of the atlas libs or 
references to gcc-4.5.3).

/bin/sh ../libtool --tag=CXX   --mode=link /opt/local/bin/g++-mp-4.5 -pipe -O0 
-g -m64 -ggdb3 -gstabs -D_THREAD_SAFE -pthread  -DHAVE_CONFIG_H 
-I/opt/local/include -I/opt/local/include/freetype2 -I/opt/local/include 
-I/opt/local/include   -Wall -W -Wshadow -Wold-style-cast -Wformat 
-Wpointer-arith -Wwrite-strings -Wcast-align -Wcast-qual -pipe -O0 -g -m64 
-ggdb3 -gstabs -D_THREAD_SAFE -pthread -D_THREAD_SAFE -pthread -pipe -O0 -g 
-m64 -ggdb3 -gstabs -D_THREAD_SAFE -pthread -version-info 1:1:0 -no-undefined 
-bindir /usr/local/bin             -D_THREAD_SAFE -pthread -L/opt/local/lib -o 
liboctave.la -rpath /usr/local/lib/octave/3.7.0+ liboctave_la-CollocWt.lo 
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liboctave_la-mx-ui32-i8nda.lo liboctave_la-mx-ui32-ui8nda.lo 
liboctave_la-mx-ui32-i16nda.lo liboctave_la-mx-ui32-ui16nda.lo 
liboctave_la-mx-ui32-i32nda.lo liboctave_la-mx-ui32-i64nda.lo 
liboctave_la-mx-ui32-ui64nda.lo liboctave_la-mx-ui64-i8nda.lo 
liboctave_la-mx-ui64-ui8nda.lo liboctave_la-mx-ui64-i16nda.lo 
liboctave_la-mx-ui64-ui16nda.lo liboctave_la-mx-ui64-i32nda.lo 
liboctave_la-mx-ui64-ui32nda.lo liboctave_la-mx-ui64-i64nda.lo 
liboctave_la-mx-i8nda-ui8nda.lo liboctave_la-mx-i8nda-i16nda.lo 
liboctave_la-mx-i8nda-ui16nda.lo liboctave_la-mx-i8nda-i32nda.lo 
liboctave_la-mx-i8nda-ui32nda.lo liboctave_la-mx-i8nda-i64nda.lo 
liboctave_la-mx-i8nda-ui64nda.lo liboctave_la-mx-i16nda-i8nda.lo 
liboctave_la-mx-i16nda-ui8nda.lo liboctave_la-mx-i16nda-ui16nda.lo 
liboctave_la-mx-i16nda-i32nda.lo liboctave_la-mx-i16nda-ui32nda.lo 
liboctave_la-mx-i16nda-i64nda.lo liboctave_la-mx-i16nda-ui64nda.lo 
liboctave_la-mx-i32nda-i8nda.lo liboctave_la-mx-i32nda-ui8nda.lo 
liboctave_la-mx-i32nda-i16nda.lo liboctave_la-mx-i32nda-ui16nda.lo 
liboctave_la-mx-i32nda-ui32nda.lo liboctave_la-mx-i32nda-i64nda.lo 
liboctave_la-mx-i32nda-ui64nda.lo liboctave_la-mx-i64nda-i8nda.lo 
liboctave_la-mx-i64nda-ui8nda.lo liboctave_la-mx-i64nda-i16nda.lo 
liboctave_la-mx-i64nda-ui16nda.lo liboctave_la-mx-i64nda-i32nda.lo 
liboctave_la-mx-i64nda-ui32nda.lo liboctave_la-mx-i64nda-ui64nda.lo 
liboctave_la-mx-ui8nda-i8nda.lo liboctave_la-mx-ui8nda-i16nda.lo 
liboctave_la-mx-ui8nda-ui16nda.lo liboctave_la-mx-ui8nda-i32nda.lo 
liboctave_la-mx-ui8nda-ui32nda.lo liboctave_la-mx-ui8nda-i64nda.lo 
liboctave_la-mx-ui8nda-ui64nda.lo liboctave_la-mx-ui16nda-i8nda.lo 
liboctave_la-mx-ui16nda-ui8nda.lo liboctave_la-mx-ui16nda-i16nda.lo 
liboctave_la-mx-ui16nda-i32nda.lo liboctave_la-mx-ui16nda-ui32nda.lo 
liboctave_la-mx-ui16nda-i64nda.lo liboctave_la-mx-ui16nda-ui64nda.lo 
liboctave_la-mx-ui32nda-i8nda.lo liboctave_la-mx-ui32nda-ui8nda.lo 
liboctave_la-mx-ui32nda-i16nda.lo liboctave_la-mx-ui32nda-ui16nda.lo 
liboctave_la-mx-ui32nda-i32nda.lo liboctave_la-mx-ui32nda-i64nda.lo 
liboctave_la-mx-ui32nda-ui64nda.lo liboctave_la-mx-ui64nda-i8nda.lo 
liboctave_la-mx-ui64nda-ui8nda.lo liboctave_la-mx-ui64nda-i16nda.lo 
liboctave_la-mx-ui64nda-ui16nda.lo liboctave_la-mx-ui64nda-i32nda.lo 
liboctave_la-mx-ui64nda-ui32nda.lo liboctave_la-mx-ui64nda-i64nda.lo 
liboctave_la-vx-ccv-cv.lo liboctave_la-vx-ccv-s.lo liboctave_la-vx-crv-rv.lo 
liboctave_la-vx-crv-s.lo liboctave_la-vx-cs-cv.lo liboctave_la-vx-cs-rv.lo 
liboctave_la-vx-cv-ccv.lo liboctave_la-vx-cv-cs.lo liboctave_la-vx-rv-crv.lo 
liboctave_la-vx-rv-cs.lo liboctave_la-vx-s-ccv.lo liboctave_la-vx-s-crv.lo 
liboctave_la-vx-fccv-fcv.lo liboctave_la-vx-fccv-fs.lo 
liboctave_la-vx-fcrv-frv.lo liboctave_la-vx-fcrv-fs.lo 
liboctave_la-vx-fcs-fcv.lo liboctave_la-vx-fcs-frv.lo 
liboctave_la-vx-fcv-fccv.lo liboctave_la-vx-fcv-fcs.lo 
liboctave_la-vx-frv-fcrv.lo liboctave_la-vx-frv-fcs.lo 
liboctave_la-vx-fs-fccv.lo liboctave_la-vx-fs-fcrv.lo liboctave_la-smx-sm-cs.lo 
liboctave_la-smx-cs-sm.lo liboctave_la-smx-scm-s.lo liboctave_la-smx-s-scm.lo 
liboctave_la-smx-scm-sm.lo liboctave_la-smx-sm-scm.lo liboctave_la-smx-m-sm.lo 
liboctave_la-smx-m-scm.lo liboctave_la-smx-cm-sm.lo liboctave_la-smx-cm-scm.lo 
liboctave_la-smx-sm-m.lo liboctave_la-smx-scm-m.lo liboctave_la-smx-sm-cm.lo 
liboctave_la-smx-scm-cm.lo liboctave_la-smx-bm-sbm.lo 
liboctave_la-smx-sbm-bm.lo ../libcruft/libcruft.la -lcholmod -lmetis -lumfpack 
-lamd -lcamd -lcolamd -lccolamd -lcxsparse -larpack -lqrupdate -lfftw3 -lfftw3f 
 -framework vecLib -lreadline -lncurses  -L/opt/local/lib -lpcre -ldl  -lm    
-lm 

From ./libcotave I typed "make > make_liboctave.txt" and obtained the output 
below and the attached file.

libtool: link: warning: 
`/opt/local/lib/gcc45/gcc/x86_64-apple-darwin11/4.5.4/../../../libgfortran.la' 
seems to be moved
ld: warning: directory not found for option 
'-L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_gcc45/gcc45/work/build/x86_64-apple-darwin11/libstdc++-v3/src'
ld: warning: directory not found for option 
'-L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_gcc45/gcc45/work/build/x86_64-apple-darwin11/libstdc++-v3/src/.libs'
ld: library not found for -lf77blas
collect2: ld returned 1 exit status
make[1]: *** [liboctave.la] Error 1
make: *** [all] Error 2

make_liboctave.txt~
Description: Binary data

The libtool script is attached as well.

Ben

libtool
Description: Binary data