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10/13: gnu: r-hdf5array: Move to (gnu packages bioconductor).


From: guix-commits
Subject: 10/13: gnu: r-hdf5array: Move to (gnu packages bioconductor).
Date: Mon, 14 Sep 2020 15:39:52 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit 63b75c01c2374edc38437215278f50b617a12c08
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Mon Sep 14 18:07:47 2020 +0200

    gnu: r-hdf5array: Move to (gnu packages bioconductor).
    
    * gnu/packages/bioinformatics.scm (r-hdf5array): Move from here...
    * gnu/packages/bioconductor.scm (r-hdf5array): ...to here.
    
    Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
 gnu/packages/bioconductor.scm   | 30 ++++++++++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 30 ------------------------------
 2 files changed, 30 insertions(+), 30 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index e7db827..b2247e8 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8348,6 +8348,36 @@ routines.")
 objects from the @code{graph} package.")
     (license license:epl1.0)))
 
+(define-public r-hdf5array
+  (package
+    (name "r-hdf5array")
+    (version "1.16.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "HDF5Array" version))
+       (sha256
+        (base32
+         "01767v90nl0499jcicpxngbbs0af5p9c5aasi5va01w3v5bnqddn"))))
+    (properties `((upstream-name . "HDF5Array")))
+    (build-system r-build-system)
+    (inputs
+     `(("zlib" ,zlib)))
+    (propagated-inputs
+     `(("r-biocgenerics" ,r-biocgenerics)
+       ("r-delayedarray" ,r-delayedarray)
+       ("r-iranges" ,r-iranges)
+       ("r-matrix" ,r-matrix)
+       ("r-rhdf5" ,r-rhdf5)
+       ("r-rhdf5lib" ,r-rhdf5lib)
+       ("r-s4vectors" ,r-s4vectors)))
+    (home-page "https://bioconductor.org/packages/HDF5Array";)
+    (synopsis "HDF5 back end for DelayedArray objects")
+    (description "This package provides an array-like container for convenient
+access and manipulation of HDF5 datasets.  It supports delayed operations and
+block processing.")
+    (license license:artistic2.0)))
+
 (define-public r-rhdf5lib
   (package
     (name "r-rhdf5lib")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 8bd42c9..d874fe9 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10654,36 +10654,6 @@ quality controls, normalization, visualization, and 
further analysis are also
 provided.")
     (license license:artistic2.0)))
 
-(define-public r-hdf5array
-  (package
-    (name "r-hdf5array")
-    (version "1.16.1")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (bioconductor-uri "HDF5Array" version))
-       (sha256
-        (base32
-         "01767v90nl0499jcicpxngbbs0af5p9c5aasi5va01w3v5bnqddn"))))
-    (properties `((upstream-name . "HDF5Array")))
-    (build-system r-build-system)
-    (inputs
-     `(("zlib" ,zlib)))
-    (propagated-inputs
-     `(("r-biocgenerics" ,r-biocgenerics)
-       ("r-delayedarray" ,r-delayedarray)
-       ("r-iranges" ,r-iranges)
-       ("r-matrix" ,r-matrix)
-       ("r-rhdf5" ,r-rhdf5)
-       ("r-rhdf5lib" ,r-rhdf5lib)
-       ("r-s4vectors" ,r-s4vectors)))
-    (home-page "https://bioconductor.org/packages/HDF5Array";)
-    (synopsis "HDF5 back end for DelayedArray objects")
-    (description "This package provides an array-like container for convenient
-access and manipulation of HDF5 datasets.  It supports delayed operations and
-block processing.")
-    (license license:artistic2.0)))
-
 (define-public r-dropbead
   (let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
         (revision "2"))



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