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01/19: gnu: qtltools: Replace references to %build-inputs.
From: |
guix-commits |
Subject: |
01/19: gnu: qtltools: Replace references to %build-inputs. |
Date: |
Fri, 3 Dec 2021 18:33:44 -0500 (EST) |
rekado pushed a commit to branch core-updates-frozen
in repository guix.
commit a5663a7c8a2c7d962dcb82e3e1c89141cd0f060b
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Dec 3 23:26:48 2021 +0100
gnu: qtltools: Replace references to %build-inputs.
* gnu/packages/bioinformatics.scm (qtltools)[arguments]: Use a gexp instead
of
referencing %build-inputs.
---
gnu/packages/bioinformatics.scm | 28 ++++++++++++++--------------
1 file changed, 14 insertions(+), 14 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index be3fce6..070d6bd 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1514,20 +1514,20 @@ long-read sequencing data.")
(arguments
`(#:tests? #f ; no tests included
#:make-flags
- (list (string-append "BOOST_INC="
- (assoc-ref %build-inputs "boost") "/include")
- (string-append "BOOST_LIB="
- (assoc-ref %build-inputs "boost") "/lib")
- (string-append "HTSLD_INC="
- (assoc-ref %build-inputs "htslib") "/include")
- (string-append "HTSLD_LIB="
- (assoc-ref %build-inputs "htslib") "/lib")
- (string-append "RMATH_INC="
- (assoc-ref %build-inputs "rmath-standalone")
- "/include")
- (string-append "RMATH_LIB="
- (assoc-ref %build-inputs "rmath-standalone")
- "/lib"))
+ ,#~(list (string-append "BOOST_INC="
+ #$(this-package-input "boost") "/include")
+ (string-append "BOOST_LIB="
+ #$(this-package-input "boost") "/lib")
+ (string-append "HTSLD_INC="
+ #$(this-package-input "htslib") "/include")
+ (string-append "HTSLD_LIB="
+ #$(this-package-input "htslib") "/lib")
+ (string-append "RMATH_INC="
+ #$(this-package-input "rmath-standalone")
+ "/include")
+ (string-append "RMATH_LIB="
+ #$(this-package-input "rmath-standalone")
+ "/lib"))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-linkage
- branch core-updates-frozen updated (6d4f260 -> 114eb98), guix-commits, 2021/12/03
- 01/19: gnu: qtltools: Replace references to %build-inputs.,
guix-commits <=
- 02/19: gnu: bedtools: Remove reference to %outputs., guix-commits, 2021/12/03
- 03/19: gnu: bless: Remove trailing #T from snippet and build phases., guix-commits, 2021/12/03
- 04/19: gnu: bless: Remove reference to %build-inputs., guix-commits, 2021/12/03
- 05/19: gnu: bowtie: Remove reference to %outputs., guix-commits, 2021/12/03
- 06/19: gnu: bowtie1: Replace reference to %outputs., guix-commits, 2021/12/03
- 07/19: gnu: cd-hit: Replace reference to %outputs., guix-commits, 2021/12/03
- 10/19: gnu: fxtract: Replace reference to %outputs., guix-commits, 2021/12/03
- 12/19: gnu: java-picard: Replace reference to %build-inputs., guix-commits, 2021/12/03
- 13/19: gnu: fastp: Replace reference to %outputs., guix-commits, 2021/12/03
- 14/19: gnu: jellyfish: Replace reference to %outputs., guix-commits, 2021/12/03