Re: [Freepooma-devel] Parallel Pooma (Repeated request)

[Richard Guenther]

On Fri, 2 Jun 2006, Svilen Sabchevski wrote:

> > > Dear colleagues,
> > >
> > > After building sucessfully a serial version of the POOMA
> > > now I am trying to do the same with the parallel one
> > > using MPICH2.
> > >
> > > Although the configure ended without problems (see the attached log
> > > file) the compilation produced an error at the very beginning. See the
> > > attached file for the error messages.
> > >
> > > Any comment and/or suggestion how to solve the problem would be
> > > greatly appreciated.
>
> > The log file got filtered away.  Can you put it online somewhere or
> > paste the relevant parts in plain-text?
> > Thanks,
> > Richard.
>
>
> Thanks Richard,
>
> Following your suggestion I am pasting below the plane text of the
> log file and the error messages.

Ok, I know the problem ;)  You need to figure out how to disable
inclusion of the C++ mpi bindings (mpicxx.h)

> In file included from /home/mpich2-install/include/mpi.h:1120,
>                 from 
> /home/p_freepooma-2.4.1/src/Threads/IterateSchedulers/SerialAsync.h:66,
>                 from /home/p_freepooma-2.4.1/src/Threads/Scheduler.h:84,
>                 from /home/p_freepooma-2.4.1/src/Threads/PoomaSmarts.h:39,
>                 from /home/p_freepooma-2.4.1/src/Pooma/Pooma.h:95,
>                 from src/Connect/Paws/PawsAppPointer.cmpl.cpp:24:
> /home/mpich2-install/include/mpicxx.h:26:2: #error "SEEK_SET is #defined but must 
> not be for the C++ binding of MPI"
> /home/mpich2-install/include/mpicxx.h:30:2: #error "SEEK_CUR is #defined but must 
> not be for the C++ binding of MPI"
> /home/mpich2-install/include/mpicxx.h:35:2: #error "SEEK_END is #defined but must 
> not be for the C++ binding of MPI"
> In file included from /home/mpich2-install/include/mpi.h:1120,
>                 from 
> /home/p_freepooma-2.4.1/src/Threads/IterateSchedulers/SerialAsync.h:66,
>                 from /home/p_freepooma-2.4.1/src/Threads/Scheduler.h:84,
>                 from /home/p_freepooma-2.4.1/src/Threads/PoomaSmarts.h:39,
>                 from /home/p_freepooma-2.4.1/src/Pooma/Pooma.h:95,
>                 from src/Connect/Paws/PawsAppPointer.cmpl.cpp:24:
> /home/mpich2-install/include/mpicxx.h: In member function `virtual void 
> MPI::Datatype::Commit()':
> /home/mpich2-install/include/mpicxx.h:151: error: exception handling disabled, 
> use -fexceptions to enable
> Command exited with non-zero status 1
> 0.63user 0.09system 0:00.65elapsed 111%CPU (0avgtext+0avgdata 
> 187728maxresident)k
> 0inputs+0outputs (11709major+0minor)pagefaults 0swaps

which is included from mpi.h.  Look for a header guard in mpicxx.h and
#define it at the beginning of the #if POOMA_MPI in src/Tulip/Messaging.h 
like f.i. the following which I need for LAM:

#if POOMA_MPI
# define MPIPP_H  // prevent lam mpicxx.h from being included
# include "Tulip/CheetahSerialize.h"
# include <mpi.h>
#endif

Maybe this get's you going further.

Richard.

--
Richard Guenther <richard dot guenther at uni-tuebingen dot de>
WWW: http://www.tat.physik.uni-tuebingen.de/~rguenth/