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02/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm6: Use bioconductor-uri.
From: |
guix-commits |
Subject: |
02/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm6: Use bioconductor-uri. |
Date: |
Wed, 4 Dec 2019 03:46:43 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 149f351f3871d1ad751ee4ebd2b389bbdcba4727
Author: Ricardo Wurmus <address@hidden>
Date: Wed Dec 4 09:25:10 2019 +0100
gnu: r-bsgenome-dmelanogaster-ucsc-dm6: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm6)[source]:
Use bioconductor-uri.
[arguments]: Permit substitution.
---
gnu/packages/bioconductor.scm | 11 ++---------
1 file changed, 2 insertions(+), 9 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 5e727ea..e332e0c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -101,21 +101,14 @@ objects.")
(version "1.4.1")
(source (origin
(method url-fetch)
- ;; We cannot use bioconductor-uri here because this tarball is
- ;; located under "data/annotation/" instead of "bioc/".
- (uri (string-append "https://www.bioconductor.org/packages/"
- "release/data/annotation/src/contrib/"
- "BSgenome.Dmelanogaster.UCSC.dm6_"
- version ".tar.gz"))
+ (uri (bioconductor-uri "BSgenome.Dmelanogaster.UCSC.dm6"
+ version 'annotation))
(sha256
(base32
"1bhj0rdgf7lspw4xby9y9mf7v7jxxz8001bc8vw8kf04rjsx6060"))))
(properties
`((upstream-name . "BSgenome.Dmelanogaster.UCSC.dm6")))
(build-system r-build-system)
- ;; As this package provides little more than a very large data file it
- ;; doesn't make sense to build substitutes.
- (arguments `(#:substitutable? #f))
(propagated-inputs
`(("r-bsgenome" ,r-bsgenome)))
(home-page
- branch master updated (19e67f8 -> e21b668), guix-commits, 2019/12/04
- 02/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm6: Use bioconductor-uri.,
guix-commits <=
- 10/29: gnu: r-org-ce-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 04/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm3-masked: Use bioconductor-uri., guix-commits, 2019/12/04
- 11/29: gnu: r-org-dm-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 24/29: gnu: r-abadata: Use bioconductor-uri., guix-commits, 2019/12/04
- 19/29: gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri., guix-commits, 2019/12/04
- 13/29: gnu: r-org-hs-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 12/29: gnu: r-org-dr-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 05/29: gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Use bioconductor-uri., guix-commits, 2019/12/04
- 09/29: gnu: r-bsgenome-mmusculus-ucsc-mm10: Use bioconductor-uri., guix-commits, 2019/12/04
- 17/29: gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Use bioconductor-uri., guix-commits, 2019/12/04