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19/29: gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri.


From: guix-commits
Subject: 19/29: gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri.
Date: Wed, 4 Dec 2019 03:46:46 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit 1afdf41b4984dfe09807583a0ee38bdff3579fa2
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Dec 4 09:33:54 2019 +0100

    gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri.
    
    * gnu/packages/bioconductor.scm 
(r-txdb-mmusculus-ucsc-mm9-knowngene)[source]:
    Use bioconductor-uri.
---
 gnu/packages/bioconductor.scm | 8 ++------
 1 file changed, 2 insertions(+), 6 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index ca4b57c..42a3f7b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -547,12 +547,8 @@ track.  The database is exposed as a @code{TxDb} object.")
     (version "3.2.2")
     (source (origin
               (method url-fetch)
-              ;; We cannot use bioconductor-uri here because this tarball is
-              ;; located under "data/annotation/" instead of "bioc/".
-              (uri (string-append "https://bioconductor.org/packages/";
-                                  "release/data/annotation/src/contrib"
-                                  "/TxDb.Mmusculus.UCSC.mm9.knownGene_"
-                                  version ".tar.gz"))
+              (uri (bioconductor-uri "TxDb.Mmusculus.UCSC.mm9.knownGene"
+                                     version 'annotation))
               (sha256
                (base32
                 "16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"))))



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