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08/29: gnu: r-bsgenome-mmusculus-ucsc-mm9-masked: Use bioconductor-uri.


From: guix-commits
Subject: 08/29: gnu: r-bsgenome-mmusculus-ucsc-mm9-masked: Use bioconductor-uri.
Date: Wed, 4 Dec 2019 03:46:44 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit 51dc4a2d7084e7c6f6968257f5a5f4c0f650dedc
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Dec 4 09:29:26 2019 +0100

    gnu: r-bsgenome-mmusculus-ucsc-mm9-masked: Use bioconductor-uri.
    
    * gnu/packages/bioconductor.scm 
(r-bsgenome-mmusculus-ucsc-mm9-masked)[source]:
    Use bioconductor-uri.
---
 gnu/packages/bioconductor.scm | 8 ++------
 1 file changed, 2 insertions(+), 6 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 19f1b1f..99856b1 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -261,12 +261,8 @@ provided by UCSC (mm9, July 2007) and stored in Biostrings 
objects.")
     (version "1.3.99")
     (source (origin
               (method url-fetch)
-              ;; We cannot use bioconductor-uri here because this tarball is
-              ;; located under "data/annotation/" instead of "bioc/".
-              (uri (string-append "http://www.bioconductor.org/packages/";
-                                  "release/data/annotation/src/contrib/"
-                                  "BSgenome.Mmusculus.UCSC.mm9.masked_"
-                                  version ".tar.gz"))
+              (uri (bioconductor-uri "BSgenome.Mmusculus.UCSC.mm9.masked"
+                                     version 'annotation))
               (sha256
                (base32
                 "00bpbm3havqcxr4g63zhllsbpd9q6svgihks7qp7x73nm4gvq7fn"))))



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