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14/29: gnu: r-org-mm-eg-db: Use bioconductor-uri.
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From: |
guix-commits |
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Subject: |
14/29: gnu: r-org-mm-eg-db: Use bioconductor-uri. |
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Date: |
Wed, 4 Dec 2019 03:46:45 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 411be88bf32caf00c8f31600e3280ae95a85c4e7
Author: Ricardo Wurmus <address@hidden>
Date: Wed Dec 4 09:32:03 2019 +0100
gnu: r-org-mm-eg-db: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-org-mm-eg-db)[source]: Use
bioconductor-uri.
---
gnu/packages/bioconductor.scm | 6 +-----
1 file changed, 1 insertion(+), 5 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 11276e9..fdb7ff0 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -405,11 +405,7 @@ on mapping using Entrez Gene identifiers.")
(version "3.7.0")
(source (origin
(method url-fetch)
- ;; We cannot use bioconductor-uri here because this tarball is
- ;; located under "data/annotation/" instead of "bioc/".
- (uri (string-append "https://www.bioconductor.org/packages/";
- "release/data/annotation/src/contrib/"
- "org.Mm.eg.db_" version ".tar.gz"))
+ (uri (bioconductor-uri "org.Mm.eg.db" version 'annotation))
(sha256
(base32
"1i3nvrd3wjigf1rmgxq1p5xxc3p8v02h5gwi62s30rkrsyjjfjxx"))))
- 04/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm3-masked: Use bioconductor-uri., (continued)
- 04/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm3-masked: Use bioconductor-uri., guix-commits, 2019/12/04
- 11/29: gnu: r-org-dm-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 24/29: gnu: r-abadata: Use bioconductor-uri., guix-commits, 2019/12/04
- 19/29: gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri., guix-commits, 2019/12/04
- 13/29: gnu: r-org-hs-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 12/29: gnu: r-org-dr-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 05/29: gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Use bioconductor-uri., guix-commits, 2019/12/04
- 09/29: gnu: r-bsgenome-mmusculus-ucsc-mm10: Use bioconductor-uri., guix-commits, 2019/12/04
- 17/29: gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Use bioconductor-uri., guix-commits, 2019/12/04
- 23/29: gnu: r-do-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 14/29: gnu: r-org-mm-eg-db: Use bioconductor-uri.,
guix-commits <=
- 08/29: gnu: r-bsgenome-mmusculus-ucsc-mm9-masked: Use bioconductor-uri., guix-commits, 2019/12/04
- 07/29: gnu: r-bsgenome-mmusculus-ucsc-mm9: Use bioconductor-uri., guix-commits, 2019/12/04
- 27/29: gnu: r-all: Use bioconductor-uri., guix-commits, 2019/12/04
- 16/29: gnu: r-genelendatabase: Use bioconductor-uri., guix-commits, 2019/12/04
- 29/29: gnu: r-rversions: Update to 2.0.1., guix-commits, 2019/12/04
- 03/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Use bioconductor-uri., guix-commits, 2019/12/04
- 28/29: gnu: r-survival: Update to 3.1-8., guix-commits, 2019/12/04
- 21/29: gnu: r-fdb-infiniummethylation-hg19: Use bioconductor-uri., guix-commits, 2019/12/04
- 20/29: gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Use bioconductor-uri., guix-commits, 2019/12/04
- 25/29: gnu: r-arrmdata: Use bioconductor-uri., guix-commits, 2019/12/04