[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
16/29: gnu: r-genelendatabase: Use bioconductor-uri.
From: |
guix-commits |
Subject: |
16/29: gnu: r-genelendatabase: Use bioconductor-uri. |
Date: |
Wed, 4 Dec 2019 03:46:45 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 717d7cda9dbbae3ca6b7101c6e499d0e12718fcf
Author: Ricardo Wurmus <address@hidden>
Date: Wed Dec 4 09:32:48 2019 +0100
gnu: r-genelendatabase: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-genelendatabase)[source]: Use
bioconductor-uri.
---
gnu/packages/bioconductor.scm | 6 +-----
1 file changed, 1 insertion(+), 5 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 4132973..9f79be3 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -474,11 +474,7 @@ by UCSC (hg19, February 2009) and stored in Biostrings
objects.")
(source
(origin
(method url-fetch)
- ;; We cannot use bioconductor-uri here because this tarball is
- ;; located under "data/experiment/" instead of "bioc/".
- (uri (string-append "https://bioconductor.org/packages/"
- "release/data/experiment/src/contrib"
- "/geneLenDataBase_" version ".tar.gz"))
+ (uri (bioconductor-uri "geneLenDataBase" version 'experiment))
(sha256
(base32
"03gm4pvsfascx7kjg0jycpf4f572mja68wwmwigs390vbmawyb4a"))))
- 13/29: gnu: r-org-hs-eg-db: Use bioconductor-uri., (continued)
- 13/29: gnu: r-org-hs-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 12/29: gnu: r-org-dr-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 05/29: gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Use bioconductor-uri., guix-commits, 2019/12/04
- 09/29: gnu: r-bsgenome-mmusculus-ucsc-mm10: Use bioconductor-uri., guix-commits, 2019/12/04
- 17/29: gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Use bioconductor-uri., guix-commits, 2019/12/04
- 23/29: gnu: r-do-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 14/29: gnu: r-org-mm-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 08/29: gnu: r-bsgenome-mmusculus-ucsc-mm9-masked: Use bioconductor-uri., guix-commits, 2019/12/04
- 07/29: gnu: r-bsgenome-mmusculus-ucsc-mm9: Use bioconductor-uri., guix-commits, 2019/12/04
- 27/29: gnu: r-all: Use bioconductor-uri., guix-commits, 2019/12/04
- 16/29: gnu: r-genelendatabase: Use bioconductor-uri.,
guix-commits <=
- 29/29: gnu: r-rversions: Update to 2.0.1., guix-commits, 2019/12/04
- 03/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Use bioconductor-uri., guix-commits, 2019/12/04
- 28/29: gnu: r-survival: Update to 3.1-8., guix-commits, 2019/12/04
- 21/29: gnu: r-fdb-infiniummethylation-hg19: Use bioconductor-uri., guix-commits, 2019/12/04
- 20/29: gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Use bioconductor-uri., guix-commits, 2019/12/04
- 25/29: gnu: r-arrmdata: Use bioconductor-uri., guix-commits, 2019/12/04
- 06/29: gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Use bioconductor-uri., guix-commits, 2019/12/04
- 26/29: gnu: r-hsmmsinglecell: Use bioconductor-uri., guix-commits, 2019/12/04
- 01/29: gnu: r-bsgenome-celegans-ucsc-ce10: Use bioconductor-uri., guix-commits, 2019/12/04
- 15/29: gnu: r-bsgenome-hsapiens-ucsc-hg19: Use bioconductor-uri., guix-commits, 2019/12/04