guix-commits
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

06/29: gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Use bioconductor-uri.


From: guix-commits
Subject: 06/29: gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Use bioconductor-uri.
Date: Wed, 4 Dec 2019 03:46:44 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit a47646bd05b0bf9af461149a731842a68a650b44
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Dec 4 09:28:34 2019 +0100

    gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Use bioconductor-uri.
    
    * gnu/packages/bioconductor.scm 
(r-bsgenome-hsapiens-ucsc-hg19-masked)[source]:
    Use bioconductor-uri.
---
 gnu/packages/bioconductor.scm | 8 ++------
 1 file changed, 2 insertions(+), 6 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index dd6b038..096f0f9 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -206,12 +206,8 @@ Finder (TRF mask).  Only the AGAPS and AMB masks are 
\"active\" by default.")
     (version "1.3.99")
     (source (origin
               (method url-fetch)
-              ;; We cannot use bioconductor-uri here because this tarball is
-              ;; located under "data/annotation/" instead of "bioc/".
-              (uri (string-append "http://www.bioconductor.org/packages/";
-                                  "release/data/annotation/src/contrib/"
-                                  "BSgenome.Hsapiens.UCSC.hg19.masked_"
-                                  version ".tar.gz"))
+              (uri (bioconductor-uri "BSgenome.Hsapiens.UCSC.hg19.masked"
+                                     version 'annotation))
               (sha256
                (base32
                 "0452pyah0kv1vsrsjbrqw4k2rm8lc2vc771dzib45gnnfz86qxrr"))))



reply via email to

[Prev in Thread] Current Thread [Next in Thread]