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21/324: gnu: r-cytoml: Update to 2.4.0.
From: |
guix-commits |
Subject: |
21/324: gnu: r-cytoml: Update to 2.4.0. |
Date: |
Sat, 5 Jun 2021 03:14:29 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit bfa23ec526ac69b490848937c52a1560612d5905
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 5 01:50:34 2021 +0200
gnu: r-cytoml: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.4.0.
[arguments]: Remove.
---
gnu/packages/bioconductor.scm | 15 ++-------------
1 file changed, 2 insertions(+), 13 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index b1ccf01..13a1515 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9703,27 +9703,16 @@ sequential way to mimic the manual gating strategy.")
(define-public r-cytoml
(package
(name "r-cytoml")
- (version "2.2.2")
+ (version "2.4.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "CytoML" version))
(sha256
(base32
- "0ckjb7bkz0cy46scrv4vl9w37g54c0yihvzmbkzilip1ikpvhxd1"))))
+ "0ixy7mmnipk8wy61wz6qy7jfbc5zhs6p5iqaii8hdprjnb841ri7"))))
(properties `((upstream-name . "CytoML")))
(build-system r-build-system)
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'fix-linking
- (lambda _
- (substitute* "src/Makevars.in"
- ;; This is to avoid having a plain directory on the list of
- ;; libraries to link.
- (("\\{h5lib\\}" match)
- (string-append match "/libhdf5.a")))
- #t)))))
(inputs
`(("libxml2" ,libxml2)
("zlib" ,zlib)))
- 09/324: gnu: Add r-scaledmatrix., (continued)
- 09/324: gnu: Add r-scaledmatrix., guix-commits, 2021/06/05
- 05/324: gnu: Add r-ggpointdensity., guix-commits, 2021/06/05
- 10/324: gnu: Add r-treeio., guix-commits, 2021/06/05
- 11/324: gnu: Add r-ggtree., guix-commits, 2021/06/05
- 06/324: gnu: Add r-arrow., guix-commits, 2021/06/05
- 18/324: gnu: r-cytolib: Update to 2.4.0., guix-commits, 2021/06/05
- 16/324: gnu: r-mzr: Update to 2.26.0., guix-commits, 2021/06/05
- 19/324: gnu: r-ncdfflow: Update to 2.38.0., guix-commits, 2021/06/05
- 23/324: gnu: r-aneufinder: Update to 1.20.0., guix-commits, 2021/06/05
- 15/324: gnu: r-msnid: Update to 1.26.0., guix-commits, 2021/06/05
- 21/324: gnu: r-cytoml: Update to 2.4.0.,
guix-commits <=
- 24/324: gnu: r-biocversion: Update to 3.13.1., guix-commits, 2021/06/05
- 25/324: gnu: r-biocgenerics: Update to 0.38.0., guix-commits, 2021/06/05
- 13/324: gnu: r-rhdf5lib: Update to 1.14.0., guix-commits, 2021/06/05
- 14/324: gnu: r-bioccheck: Update to 1.28.0., guix-commits, 2021/06/05
- 17/324: gnu: r-rhdf5: Update to 2.36.0., guix-commits, 2021/06/05
- 20/324: gnu: r-flowworkspace: Update to 4.4.0., guix-commits, 2021/06/05
- 22/324: gnu: r-hdf5array: Update to 1.20.0., guix-commits, 2021/06/05
- 07/324: gnu: Add r-restfulr., guix-commits, 2021/06/05
- 12/324: gnu: Add r-metapod., guix-commits, 2021/06/05
- 26/324: gnu: r-coverageview: Update to 1.30.0., guix-commits, 2021/06/05