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18/324: gnu: r-cytolib: Update to 2.4.0.
From: |
guix-commits |
Subject: |
18/324: gnu: r-cytolib: Update to 2.4.0. |
Date: |
Sat, 5 Jun 2021 03:14:28 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 5c37a048bb06e4350a49de71bdfe2a18c4ad7e6a
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 5 01:48:51 2021 +0200
gnu: r-cytolib: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.4.0.
[arguments]: Remove.
[native-inputs]: Remove pkg-config.
---
gnu/packages/bioconductor.scm | 18 +++---------------
1 file changed, 3 insertions(+), 15 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 4d88119..37d39ef 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9313,30 +9313,18 @@ cluster count and membership by stability evidence in
unsupervised analysis.")
(define-public r-cytolib
(package
(name "r-cytolib")
- (version "2.2.1")
+ (version "2.4.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "cytolib" version))
(sha256
(base32
- "0y8mxrg3jh9bahsf9rblgyja37m1x1ncxfnrli91xjyg0582kh7r"))))
+ "0wl7zqwv0i38dfzqfsz40n3mcbxi38ffn1rbd5pm9s7hq16zr4nv"))))
(properties `((upstream-name . "cytolib")))
(build-system r-build-system)
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'fix-linking
- (lambda _
- (substitute* "src/Makevars.in"
- ;; This is to avoid having a plain directory on the list of
- ;; libraries to link.
- (("\\(RHDF5_LIBS\\)" match)
- (string-append match "/libhdf5.a")))
- #t)))))
(native-inputs
- `(("r-knitr" ,r-knitr)
- ("pkg-config" ,pkg-config)))
+ `(("r-knitr" ,r-knitr)))
(propagated-inputs
`(("r-bh" ,r-bh)
("r-rcpp" ,r-rcpp)
- branch master updated (7382aa0 -> 8f12002), guix-commits, 2021/06/05
- 01/324: gnu: pigx-rnaseq: Update to 0.0.13., guix-commits, 2021/06/05
- 02/324: guix: Update to Bioconductor 3.13., guix-commits, 2021/06/05
- 04/324: gnu: Add r-ggnewscale., guix-commits, 2021/06/05
- 03/324: gnu: Add r-aplot., guix-commits, 2021/06/05
- 09/324: gnu: Add r-scaledmatrix., guix-commits, 2021/06/05
- 05/324: gnu: Add r-ggpointdensity., guix-commits, 2021/06/05
- 10/324: gnu: Add r-treeio., guix-commits, 2021/06/05
- 11/324: gnu: Add r-ggtree., guix-commits, 2021/06/05
- 06/324: gnu: Add r-arrow., guix-commits, 2021/06/05
- 18/324: gnu: r-cytolib: Update to 2.4.0.,
guix-commits <=
- 16/324: gnu: r-mzr: Update to 2.26.0., guix-commits, 2021/06/05
- 19/324: gnu: r-ncdfflow: Update to 2.38.0., guix-commits, 2021/06/05
- 23/324: gnu: r-aneufinder: Update to 1.20.0., guix-commits, 2021/06/05
- 15/324: gnu: r-msnid: Update to 1.26.0., guix-commits, 2021/06/05
- 21/324: gnu: r-cytoml: Update to 2.4.0., guix-commits, 2021/06/05
- 24/324: gnu: r-biocversion: Update to 3.13.1., guix-commits, 2021/06/05
- 25/324: gnu: r-biocgenerics: Update to 0.38.0., guix-commits, 2021/06/05
- 13/324: gnu: r-rhdf5lib: Update to 1.14.0., guix-commits, 2021/06/05
- 14/324: gnu: r-bioccheck: Update to 1.28.0., guix-commits, 2021/06/05
- 17/324: gnu: r-rhdf5: Update to 2.36.0., guix-commits, 2021/06/05